RNA–Protein interactions for RNA: ENST00000484704.5

HLA-F-226, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,201 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-226ENST00000484704 AQP11Q8NBQ7 271 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 OR2T29Q8NH02 315 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 OR4K13Q8NH42 304 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 ABHD4Q8TB40 342 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 POM121L2Q96KW2 1035 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 TBC1D23Q9NUY8 699 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 MYEF2Q9P2K5 600 aaKnown RBP12.9□□□□□ -0.34
HLA-F-226ENST00000484704 U3KQV3 271 aa12.9□□□□□ -0.34
HLA-F-226ENST00000484704 CR1P17927 2039 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 ABCA1O95477 2261 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 PLSCR5A0PG75 271 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
HLA-F-226ENST00000484704 IDH3BO43837 385 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 CD5LO43866 347 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 ABHD16AO95870 558 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 CLPTM1O96005 669 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 HLA-DQA2P01906 255 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 RAP2AP10114 183 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 NAT2P11245 290 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 NR4A2P43354 598 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 MAGEA2P43356 314 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 FXYD6P3P58550 94 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 PPP1R8Q12972 351 aaKnown RBP12.89□□□□□ -0.35
HLA-F-226ENST00000484704 MSMPQ1L6U9 139 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 TMEM249Q2WGJ8 235 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 SPATA46Q5T0L3 261 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 PGM2L1Q6PCE3 622 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 ZNF620Q6ZNG0 422 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 PTCHD4Q6ZW05 846 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 SPATA24Q86W54 205 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 C1orf174Q8IYL3 243 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 SDR9C7Q8NEX9 313 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 OR52E2Q8NGJ4 325 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 C4orf45Q96LM5 186 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 NMNAT3Q96T66 252 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 EGLN3Q9H6Z9 239 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 RPRD1BQ9NQG5 326 aaKnown RBP12.89□□□□□ -0.35
HLA-F-226ENST00000484704 ASH2LQ9UBL3 628 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 GRIP1Q9Y3R0 1128 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 CDH10Q9Y6N8 788 aa12.89□□□□□ -0.35
HLA-F-226ENST00000484704 ANK3Q12955 4377 aaKnown RBP12.88□□□□□ -0.35
HLA-F-226ENST00000484704 CHD3Q12873 2000 aaKnown RBP12.88□□□□□ -0.35
HLA-F-226ENST00000484704 LOC100509620A0A075B734 347 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 ARPC3O15145 178 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 CST1P01037 141 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 SCG5P05408 212 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 COX5BP10606 129 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 HIST1H1CP16403 213 aaKnown RBP12.88□□□□□ -0.35
HLA-F-226ENST00000484704 WNT5AP41221 380 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 HMGA2P52926 109 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 PPP1CBP62140 327 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
HLA-F-226ENST00000484704 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.88□□□□□ -0.35
HLA-F-226ENST00000484704 FLOT2Q14254 428 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 SLC36A3Q495N2 470 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 SLC35F1Q5T1Q4 408 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 OTPQ5XKR4 325 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 CYB5R2Q6BCY4 276 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 OR2AJ1Q8NGZ0 328 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 SLC25A40Q8TBP6 338 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 TSSK2Q96PF2 358 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 BTBD10Q9BSF8 475 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 CDADC1Q9BWV3 514 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 BPESC1Q9GZL8 116 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 YY1AP1Q9H869 796 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 HINT3Q9NQE9 182 aaKnown RBP12.88□□□□□ -0.35
HLA-F-226ENST00000484704 DECR2Q9NUI1 292 aa12.88□□□□□ -0.35
HLA-F-226ENST00000484704 DHRS12A0PJE2 317 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 AQP12BA6NM10 295 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 E2F6O75461 281 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 DNAJC8O75937 253 aaPredicted RBP12.87□□□□□ -0.35
HLA-F-226ENST00000484704 MPZL1O95297 269 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 GASTP01350 101 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 ZNF250P15622 560 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 GSTM3P21266 225 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 GZMKP49863 264 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 MICAQ29983 383 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 PCGF3Q3KNV8 242 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 RASSF6Q6ZTQ3 369 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 AQP12AQ8IXF9 295 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 ZNF101Q8IZC7 436 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 OR10G2Q8NGC3 310 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 OR4C15Q8NGM1 316 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 RDH5Q92781 318 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 SNX18Q96RF0 628 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 CHID1Q9BWS9 393 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 TSSK6Q9BXA6 273 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 FN3KQ9H479 309 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
HLA-F-226ENST00000484704 IGLV3-9A0A075B6K5 115 aa12.86□□□□□ -0.35
HLA-F-226ENST00000484704 C17orf100A8MU93 164 aa12.86□□□□□ -0.35
HLA-F-226ENST00000484704 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
HLA-F-226ENST00000484704 VWC2LB2RUY7 222 aa12.86□□□□□ -0.35
HLA-F-226ENST00000484704 LYNX1G3V0Z9 82 aa12.86□□□□□ -0.35
HLA-F-226ENST00000484704 TIMM8AO60220 97 aaPredicted RBP12.86□□□□□ -0.35
HLA-F-226ENST00000484704 GPANK1O95872 356 aa12.86□□□□□ -0.35
HLA-F-226ENST00000484704 LYNX1P0DP58 116 aa12.86□□□□□ -0.35
HLA-F-226ENST00000484704 HOXB6P17509 224 aaKnown RBP12.86□□□□□ -0.35
HLA-F-226ENST00000484704 RASSF2P50749 326 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms