RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 ITPKCQ96DU7 683 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 ZC3HAV1LQ96H79 300 aaKnown RBP11.75□□□□□ -0.53
CPNE1-225ENST00000483495 OR2M2Q96R28 347 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 ABHD1Q96SE0 405 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 FAM173AQ9BQD7 235 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 ABI3Q9P2A4 366 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 OR52A1Q9UKL2 312 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 EMC9Q9Y3B6 208 aa11.75□□□□□ -0.53
CPNE1-225ENST00000483495 TMEM269A0A1B0GVZ9 245 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 NPIPA2E9PIF3 369 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 NPIPA3F8WFD2 350 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 SMAD9O15198 467 aaKnown RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FTH1P19P0C7X4 201 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ACHEP22303 614 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 GFRA1P56159 465 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CLDN20P56880 219 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 HACD4Q5VWC8 232 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ASPHD2Q6ICH7 369 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF704Q6ZNC4 412 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FOXL2NBQ6ZUU3 175 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ESPNLQ6ZVH7 1005 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ZIC4Q8N9L1 334 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 DEFB124Q8NES8 71 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FER1L6-AS2Q96M78 137 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 SFXN2Q96NB2 322 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF385AQ96PM9 386 aaKnown RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 UTP23Q9BRU9 249 aaKnown RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 LIN7BQ9HAP6 207 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FAM206AQ9NX38 181 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 GDF2Q9UK05 429 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FOXJ3Q9UPW0 622 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 DHDHQ9UQ10 334 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CAMK2AQ9UQM7 478 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 AHCTF1Q8WYP5 2266 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 IGHV3-15A0A0B4J1V0 119 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 LINC00854A0A1B0GVQ3 168 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CDRT15L2A8MXV6 281 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 H0YC42 278 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 LINC01387J3KSC0 135 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FSTP19883 344 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CSRP1P21291 193 aaKnown RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ENPP1P22413 925 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ITGA3P26006 1051 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CDAP32320 146 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CSNK1A1P48729 337 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 MMP15P51511 669 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 PITPNAQ00169 270 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 TCF15Q12870 199 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CFAP77Q6ZQR2 320 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CMTM4Q8IZR5 234 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 IL22RA1Q8N6P7 574 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 OR2M7Q8NG81 312 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 INTS12Q96CB8 462 aaKnown RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 SLC25A38Q96DW6 304 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 SIGLEC12Q96PQ1 595 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 THAP7Q9BT49 309 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ABCG5Q9H222 651 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 SEC61A2Q9H9S3 476 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 EMC7Q9NPA0 242 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 CENPMQ9NSP4 180 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 RBFOX1Q9NWB1 397 aaKnown RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 OR5V1Q9UGF6 321 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 FOXD3Q9UJU5 478 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-225ENST00000483495 HHLA2Q9UM44 414 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 GTF2A1LQ9UNN4 478 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 ETV7Q9Y603 341 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 OTOGLQ3ZCN5 2332 aa11.74□□□□□ -0.53
CPNE1-225ENST00000483495 A0A1B0GVC2 190 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 A6NIN4 97 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 ANXA2P2A6NMY6 339 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 BOLA2-SMG1P6H3BVE0 249 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 CTDSPLO15194 276 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 ANXA2P07355 339 aaKnown RBP11.73□□□□□ -0.53
CPNE1-225ENST00000483495 FAM157BP0CG42 384 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 UBCP0CG48 685 aaKnown RBP11.73□□□□□ -0.53
CPNE1-225ENST00000483495 PRKAR1AP10644 381 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 CD37P11049 281 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 IGFBP3P17936 291 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-225ENST00000483495 GDF1P27539 372 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 MAP2K3P46734 347 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 CARD18P57730 90 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
CPNE1-225ENST00000483495 GABREP78334 506 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 WIPI1Q5MNZ9 446 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-225ENST00000483495 TMEM244Q5VVB8 128 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 TMPRSS12Q86WS5 348 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 OR2AJ1Q8NGZ0 328 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 OR2V1Q8NHB1 315 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 RFT1Q96AA3 541 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 NIPAL2Q9H841 368 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 KNTC1P50748 2209 aa11.73□□□□□ -0.53
CPNE1-225ENST00000483495 MED12Q93074 2177 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 DOCK10Q96BY6 2186 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 LOC107986453A0A1B0GWG9 222 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 ZNF878C9JN71 531 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 EIF1AYO14602 144 aaKnown RBP11.72□□□□□ -0.53
CPNE1-225ENST00000483495 LYRM1O43325 122 aa11.72□□□□□ -0.53
CPNE1-225ENST00000483495 GSTZ1O43708 216 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms