RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 NAT2P11245 290 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 ZNF23P17027 643 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 NOS3P29474 1203 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 WNT5AP41221 380 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 CDKN2AP42771 156 aaKnown RBP11.89□□□□□ -0.51
VARS-225ENST00000482996 MAGEA2P43356 314 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 HTR5AP47898 357 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 CENPAP49450 140 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 ARHGDIAP52565 204 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 HMGA2P52926 109 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 LSM6P62312 80 aaKnown RBP11.89□□□□□ -0.51
VARS-225ENST00000482996 AQP6Q13520 282 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 PCGF3Q3KNV8 242 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 ALKBH6Q3KRA9 238 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 RPL13AP3Q6NVV1 102 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 PGBD2Q6P3X8 592 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 LEG1Q6P5S2 330 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 PGM2L1Q6PCE3 622 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 ABHD4Q8TB40 342 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 RDH5Q92781 318 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 SNX18Q96RF0 628 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 TRIM15Q9C019 465 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 NUAK2Q9H093 628 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 C1orf21Q9H246 121 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 POLR1DQ9Y2S0 133 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 LYVE1Q9Y5Y7 322 aa11.89□□□□□ -0.51
VARS-225ENST00000482996 C17orf100A8MU93 164 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 LYNX1G3V0Z9 82 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 H3BSA7 217 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CIB2O75838 187 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CCNB2O95067 398 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 ABHD16AO95870 558 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 IGHV3-13P01766 116 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 HPXP02790 462 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 LYNX1P0DP58 116 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CHN2P52757 468 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 PPP1CBP62140 327 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 MRPS11P82912 194 aaKnown RBP11.88□□□□□ -0.51
VARS-225ENST00000482996 MS4A2Q01362 244 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 SPATA46Q5T0L3 261 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 ZNF620Q6ZNG0 422 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 ZNF101Q8IZC7 436 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 SLC25A40Q8TBP6 338 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CCDC124Q96CT7 223 aaKnown RBP11.88□□□□□ -0.51
VARS-225ENST00000482996 ASB9Q96DX5 294 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 C4orf45Q96LM5 186 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 THTPAQ9BU02 230 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 REEP1Q9H902 201 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CHODLQ9H9P2 273 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 PLEK2Q9NYT0 353 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 TAS2R1Q9NYW7 299 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 ASH2LQ9UBL3 628 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CDH10Q9Y6N8 788 aa11.88□□□□□ -0.51
VARS-225ENST00000482996 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 ATRQ13535 2644 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 PLSCR5A0PG75 271 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 ICMTO60725 284 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 DNAJC8O75937 253 aaPredicted RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 HIST1H1CP16403 213 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 ZNF16P17020 682 aaPredicted RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 ACHEP22303 614 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 GLO1Q04760 184 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 TRAP1Q12931 704 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 RIN1Q13671 783 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 KCNMB1Q16558 191 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 ELFN2Q5R3F8 820 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 MBNL2Q5VZF2 373 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 OR2T5Q6IEZ7 315 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 RFPL4BQ6ZWI9 263 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 VASH1Q7L8A9 365 aaPredicted RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 HIPK1Q86Z02 1210 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 OR9Q2Q8NGE9 314 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 OR2T29Q8NH02 315 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 OR4K13Q8NH42 304 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 KLF14Q8TD94 323 aaPredicted RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 MARS2Q96GW9 593 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 TSSK2Q96PF2 358 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 NMNAT3Q96T66 252 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 OR2J1Q9GZK6 312 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 RACGAP1Q9H0H5 632 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 MMADHCQ9H3L0 296 aaPredicted RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 SRA1Q9HD15 236 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 NKIRAS2Q9NYR9 191 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 B9D1Q9UPM9 204 aa11.87□□□□□ -0.51
VARS-225ENST00000482996 SAMHD1Q9Y3Z3 626 aaKnown RBP11.87□□□□□ -0.51
VARS-225ENST00000482996 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.87□□□□□ -0.513e-7■■■■□ 24.6
VARS-225ENST00000482996 LOC100289279A0A1B0GTE1 492 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 TPD52L2O43399 206 aaKnown RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 NCR1O76036 304 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 MPZL1O95297 269 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 NGFP01138 241 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 TACSTD2P09758 323 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 RAP2AP10114 183 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 GSTM3P21266 225 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 TUBG1P23258 451 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 LIPAP38571 399 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 MPV17P39210 176 aa11.86□□□□□ -0.51
VARS-225ENST00000482996 GPR6P46095 362 aaPredicted RBP11.86□□□□□ -0.51
VARS-225ENST00000482996 ZNF81P51508 661 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms