RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 SMN1Q16637 294 aaKnown RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 PCK2Q16822 640 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 PABPC1L2AQ5JQF8 200 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SP5Q6BEB4 398 aaPredicted RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 KRT80Q6KB66 452 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SLC18B1Q6NT16 456 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SLC16A9Q7RTY1 509 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 FAM169BQ8N8A8 192 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 FAM222BQ8WU58 562 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 RNFT2Q96EX2 444 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 PSMG3-AS1Q96PY0 264 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 OR2H1Q9GZK4 316 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 C1orf198Q9H425 327 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 PLEK2Q9NYT0 353 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 FBXL3Q9UKT7 428 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 LHFPL6Q9Y693 200 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 M0R1B8 84 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SGCEO43556 437 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 DENRO43583 198 aaKnown RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 PTHP01270 115 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 IGKV3-15P01624 115 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SERPINA5P05154 406 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SBK2P0C263 348 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 DBTP11182 482 aaKnown RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 IDH3GP51553 393 aaPredicted RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF91Q05481 1191 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 TMEM154Q6P9G4 183 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 TMEM108Q6UXF1 575 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 DCXRQ7Z4W1 244 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF454Q8N9F8 522 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 AKR7LQ8NHP1 331 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 SMAP2Q8WU79 429 aaPredicted RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 THEM6Q8WUY1 208 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 YIPF3Q9GZM5 350 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 ESRP2Q9H6T0 727 aaKnown RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 ADGRL4Q9HBW9 690 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 NOX3Q9HBY0 568 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 LAMP5Q9UJQ1 280 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 GDF2Q9UK05 429 aaPredicted RBP9.75□□□□□ -0.85
CLDN11-205ENST00000480067 TMEM14AQ9Y6G1 99 aa9.75□□□□□ -0.85
CLDN11-205ENST00000480067 DCHS2Q6V1P9 2916 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 APOL3O95236 402 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 FADS2O95864 444 aaKnown RBP9.74□□□□□ -0.85
CLDN11-205ENST00000480067 COX6B1P14854 86 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 STOMP27105 288 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 HCCSP53701 268 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 CSNK2BP67870 215 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 EIF2B1Q14232 305 aaKnown RBP9.74□□□□□ -0.85
CLDN11-205ENST00000480067 RAB39AQ14964 217 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 C3orf36Q3SXR2 165 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 KLHL22Q53GT1 634 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 C6orf141Q5SZD1 244 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF774Q6NX45 483 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 ACBD4Q8NC06 268 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 CPEB3Q8NE35 698 aaKnown RBP9.74□□□□□ -0.85
CLDN11-205ENST00000480067 IL17RDQ8NFM7 739 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 BPIFB6Q8NFQ5 453 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 OR4F15Q8NGB8 312 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 OTOSQ8NHW6 89 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 MNTQ99583 582 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 WNT5BQ9H1J7 359 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 NPAP1Q9NZP6 1156 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 CRNNQ9UBG3 495 aaPredicted RBP9.74□□□□□ -0.85
CLDN11-205ENST00000480067 PCDHGB1Q9Y5G3 927 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 CENPEQ02224 2701 aa9.74□□□□□ -0.85
CLDN11-205ENST00000480067 IGHV1-18A0A0C4DH31 117 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 DOK2O60496 412 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 IGLV1-44P01699 117 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 LYNP07948 512 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 OR2T7P0C7T2 308 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF14P17017 642 aaPredicted RBP9.73□□□□□ -0.85
CLDN11-205ENST00000480067 ALOX5APP20292 161 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CCNOP22674 350 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CRYGSP22914 178 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 PTAFRP25105 342 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 APEX1P27695 318 aaKnown RBP9.73□□□□□ -0.85
CLDN11-205ENST00000480067 APLNRP35414 380 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CXCR4P61073 352 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 HIST1H3AP68431 136 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 RAB40BQ12829 278 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 ECH1Q13011 328 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 MED21Q13503 144 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 TAF13Q15543 124 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CCDC92Q53HC0 331 aaPredicted RBP9.73□□□□□ -0.85
CLDN11-205ENST00000480067 BEX5Q5H9J7 111 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 ELFN2Q5R3F8 820 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 HIST2H3PS2Q5TEC6 136 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CFAP77Q6ZQR2 320 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 HIST2H3AQ71DI3 136 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 VASH1Q7L8A9 365 aaPredicted RBP9.73□□□□□ -0.85
CLDN11-205ENST00000480067 CDC20BQ86Y33 519 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 ZNF584Q8IVC4 421 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 SLC35F2Q8IXU6 374 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 SLC30A7Q8NEW0 376 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 OR10H4Q8NGA5 316 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 OR2T27Q8NH04 317 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 OR1F12Q8NHA8 337 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 LGALS12Q96DT0 336 aa9.73□□□□□ -0.85
CLDN11-205ENST00000480067 MAP6Q96JE9 813 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms