RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 DEDDO75618 318 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 FGFR1OPO95684 399 aaKnown RBP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 PPP1R2P41236 205 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 ACOT2P49753 483 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF136P52737 540 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 GNGT1P63211 74 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 TFAMQ00059 246 aaKnown RBP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 DPYSQ14117 519 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF79Q15937 498 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 SNCBQ16143 134 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 TEX44Q53QW1 395 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 C9orf129Q5T035 196 aaKnown RBP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 LRRC31Q6UY01 552 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 WASH2PQ6VEQ5 465 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 CROCCP2Q86T23 111 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 ZNF589Q86UQ0 364 aaPredicted RBP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 IFNEQ86WN2 208 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 IFT20Q8IY31 132 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 GIPC3Q8TF64 312 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 UPRTQ96BW1 309 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 MAGEB18Q96M61 343 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 ZIM3Q96PE6 472 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 STMN4Q9H169 189 aaPredicted RBP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 CENPHQ9H3R5 247 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 NTN4Q9HB63 628 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 FANCEQ9HB96 536 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 LPAR2Q9HBW0 351 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 PNO1Q9NRX1 252 aaKnown RBP3.53□□□□□ -1.84
CCDC171-207ENST00000478913 RNF14Q9UBS8 474 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 ATP6V1HQ9UI12 483 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 FOXJ3Q9UPW0 622 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 HS3ST2Q9Y278 367 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 SAR1BQ9Y6B6 198 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 SPTBP11277 2137 aa3.53□□□□□ -1.84
CCDC171-207ENST00000478913 A0A0D9SFI3 127 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 A0A1W2PP18 115 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 LRRC30A6NM36 301 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 E7EQ34 232 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 H3BQF6 201 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 EIF3HO15372 352 aaKnown RBP eCLIP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 SLC37A4O43826 429 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 PRPSAP2O60256 369 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 LY6HO94772 140 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 LYPLA2O95372 231 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 UQCRBP14927 111 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 ZNF19P17023 458 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 FUT1P19526 365 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 CCNA2P20248 432 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 ZP3P21754 424 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 PCMT1P22061 227 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 WARSP23381 471 aaKnown RBP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 RPA1P27694 616 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 CDH5P33151 784 aaPredicted RBP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 CAPZBP47756 277 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 SH3BGRP55822 239 aaPredicted RBP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 RPL32P62910 135 aaKnown RBP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 BAMBIQ13145 260 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 IL17AQ16552 155 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 NRF1Q16656 503 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 CCDC122Q5T0U0 273 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 DCST2Q5T1A1 773 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 RESP18Q5W5W9 173 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 AP1ARQ63HQ0 302 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 SCYL2Q6P3W7 929 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 MOB1BQ7L9L4 216 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 LCA5Q86VQ0 697 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 MISPQ8IVT2 679 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 OR6K2Q8NGY2 324 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 KCTD4Q8WVF5 259 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 N4BP2L2Q92802 583 aaPredicted RBP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 LRRC58Q96CX6 371 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 PHYHIPLQ96FC7 376 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 SMARCD1Q96GM5 515 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 TMEM80Q96HE8 168 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 VPS39Q96JC1 886 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 TCEANC2Q96MN5 208 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 TBCDQ9BTW9 1192 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 NSRP1Q9H0G5 558 aaKnown RBP3.52□□□□□ -1.85
CCDC171-207ENST00000478913 PDE10AQ9Y233 779 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 CLCA3PQ9Y6N3 262 aa3.52□□□□□ -1.85
CCDC171-207ENST00000478913 A0A1B0GW55 424 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 CLPSL1A2RUU4 121 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 ZSCAN5BA6NJL1 495 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 ZFP92A6NM28 416 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 A8MXQ7 604 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 E7EWF7 191 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 E9PLD3 99 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 FAM189A1O60320 539 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 SERF1AO75920 110 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 LYPD3O95274 346 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 PTBP3O95758 552 aaKnown RBP3.51□□□□□ -1.85
CCDC171-207ENST00000478913 CD8AP01732 235 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 HBQ1P09105 142 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 DUX4L2P0CJ85 424 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 DUX4L3P0CJ86 424 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 DUX4L5P0CJ88 424 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 DUX4L6P0CJ89 424 aa3.51□□□□□ -1.85
CCDC171-207ENST00000478913 DUX4L7P0CJ90 424 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 151.6 ms