RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ESCO2Q56NI9 601 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 C1orf94Q6P1W5 598 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 FOXL2NBQ6ZUU3 175 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 SYT9Q86SS6 491 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 OAFQ86UD1 273 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 NRMQ8IXM6 262 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 DEFB108BQ8NET1 73 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 OR2T12Q8NG77 320 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 LZICQ8WZA0 190 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 DVL3Q92997 716 aaPredicted RBP11.18□□□□□ -0.62
VCL-205ENST00000478896 SAMD8Q96LT4 415 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 GPA33Q99795 319 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 FNDC11Q9BVV2 318 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 TMEM120AQ9BXJ8 343 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 PATZ1Q9HBE1 687 aaKnown RBP11.18□□□□□ -0.62
VCL-205ENST00000478896 EMC7Q9NPA0 242 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 POLE4Q9NR33 117 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 MMP26Q9NRE1 261 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 MRGBPQ9NV56 204 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 OR5V1Q9UGF6 321 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 KLHL21Q9UJP4 597 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 A4GNTQ9UNA3 340 aa11.18□□□□□ -0.62
VCL-205ENST00000478896 HTR3EA5X5Y0 456 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 DNAJC9-AS1A6NH13 148 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 XKRYO14609 159 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 SURF4O15260 269 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 SGCEO43556 437 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 HKR1P10072 659 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 COX5BP10606 129 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 KDELR2P33947 212 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 RBMXP38159 391 aaKnown RBP11.17□□□□□ -0.62
VCL-205ENST00000478896 SEC61A1P61619 476 aaKnown RBP11.17□□□□□ -0.62
VCL-205ENST00000478896 CDK5R2Q13319 367 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 TRAM2Q15035 370 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 COQ5Q5HYK3 327 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 ZNF283Q8N7M2 679 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 LRRC75AQ8NAA5 344 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 PCYOX1LQ8NBM8 494 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 OR13C2Q8NGS9 318 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 C10orf82Q8WW14 230 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 ITLN1Q8WWA0 313 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 ZNF583Q96ND8 569 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 WACQ9BTA9 647 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 NDEL1Q9GZM8 345 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 MS4A7Q9GZW8 240 aaPredicted RBP11.17□□□□□ -0.62
VCL-205ENST00000478896 POFUT1Q9H488 388 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 ZMAT3Q9HA38 289 aaKnown RBP11.17□□□□□ -0.62
VCL-205ENST00000478896 MAN2C1Q9NTJ4 1040 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 TBCCD1Q9NVR7 557 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 PLEK2Q9NYT0 353 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 RHCGQ9UBD6 479 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 GRHPRQ9UBQ7 328 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 ZNF69Q9UC07 566 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 PPP1R3CQ9UQK1 317 aa11.17□□□□□ -0.62
VCL-205ENST00000478896 J3KTA2 159 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 TMPRSS2O15393 492 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 NPPAP01160 153 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 IFNW1P05000 195 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 ZNF12P17014 697 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 KITLGP21583 273 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 TUBG1P23258 451 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 PRTN3P24158 256 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 GPR4P46093 362 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 SLC9A3P48764 834 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 SELENOWP63302 87 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 GUCY1A3Q02108 690 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 BAMBIQ13145 260 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 ANKDD1AQ495B1 522 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 ZNF730Q6ZMV8 503 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 DOK3Q7L591 496 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 OFCC1Q8IZS5 231 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 OR5AS1Q8N127 324 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 MUC20Q8N307 709 aaPredicted RBP11.16□□□□□ -0.62
VCL-205ENST00000478896 CMBLQ96DG6 245 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 COG8Q96MW5 612 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 ZNF570Q96NI8 536 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 OR2V2Q96R30 315 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 C1QTNF5Q9BXJ0 243 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 RERGLQ9H628 205 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 TUBG2Q9NRH3 451 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 GID8Q9NWU2 228 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 IL19Q9UHD0 177 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 ADAM18Q9Y3Q7 739 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 INSIG2Q9Y5U4 225 aa11.16□□□□□ -0.62
VCL-205ENST00000478896 LOC100653049A0A140TA62 436 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 ELOVL7A1L3X0 281 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 A8MXK9 166 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 TRAPPC2LH3BP13 241 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 KRT34O76011 436 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 SCG5P05408 212 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 TROVE2P10155 538 aaKnown RBP eCLIP11.15□□□□□ -0.62
VCL-205ENST00000478896 MDH2P40926 338 aaKnown RBP11.15□□□□□ -0.62
VCL-205ENST00000478896 SLC6A9P48067 706 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 PRKCDQ05655 676 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 SF3A3Q12874 501 aaKnown RBP eCLIP11.15□□□□□ -0.62
VCL-205ENST00000478896 KLF10Q13118 480 aa11.15□□□□□ -0.62
VCL-205ENST00000478896 AQP6Q13520 282 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms