RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 YIPF5Q969M3 257 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 C4orf45Q96LM5 186 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 SOX7Q9BT81 388 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 NUAK2Q9H093 628 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 OR52D1Q9H346 318 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 ELOVL3Q9HB03 270 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 CGGBP1Q9UFW8 167 aaPredicted RBP19.99■□□□□ 0.79
C9orf3-215ENST00000478473 IL20RAQ9UHF4 553 aa19.99■□□□□ 0.79
C9orf3-215ENST00000478473 DNHD1Q96M86 4753 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 LOC100289279A0A1B0GTE1 492 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 TCRBV5S2A0A599 114 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 LRP5LA4QPB2 252 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 SOCS2O14508 198 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 IDH3BO43837 385 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 SLC16A7O60669 478 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 ATP6V1B2P21281 511 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 CALB2P22676 271 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 SLC6A6P31641 620 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 THBS2P35442 1172 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 MAGEB1P43366 347 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 HIST1H3AP68431 136 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 MXRA7P84157 204 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 TSPAN31Q12999 210 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 FAM209AQ5JX71 171 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 HIST2H3PS2Q5TEC6 136 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 TMEM154Q6P9G4 183 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 PGM2L1Q6PCE3 622 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 HIST2H3AQ71DI3 136 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 VASH1Q7L8A9 365 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-215ENST00000478473 LINC00471Q8N535 108 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 SLC25A40Q8TBP6 338 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 FANK1Q8TC84 345 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 POP5Q969H6 163 aaKnown RBP19.98■□□□□ 0.79
C9orf3-215ENST00000478473 TRIM15Q9C019 465 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 MAGIXQ9H6Y5 334 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 FAM53CQ9NYF3 392 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 KCNS2Q9ULS6 477 aa19.98■□□□□ 0.79
C9orf3-215ENST00000478473 COA3Q9Y2R0 106 aaPredicted RBP19.98■□□□□ 0.79
C9orf3-215ENST00000478473 IGLV1-36A0A0B4J1U3 117 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 SGCEO43556 437 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 OR10H3O60404 316 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 NGFP01138 241 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 MT-ND5P03915 603 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 IGFBP5P24593 272 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 CRABP1P29762 137 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 LIPAP38571 399 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 CRYBB2P43320 205 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 PPP1CBP62140 327 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 TRIP10Q15642 601 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 ARL9Q6T311 187 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 CCDC197Q8NCU1 140 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 IPCEF1Q8WWN9 437 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-215ENST00000478473 OR2J1Q9GZK6 312 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 C1orf21Q9H246 121 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 ZNF275Q9NSD4 429 aaPredicted RBP19.97■□□□□ 0.79
C9orf3-215ENST00000478473 TMCC3Q9ULS5 477 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 LYVE1Q9Y5Y7 322 aa19.97■□□□□ 0.79
C9orf3-215ENST00000478473 OR6C6A6NF89 314 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 J3QW42 95 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 GAAP10253 952 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 GCH1P30793 250 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 IL2RGP31785 369 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 MPV17P39210 176 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 GPR6P46095 362 aaPredicted RBP19.96■□□□□ 0.79
C9orf3-215ENST00000478473 CDH15P55291 814 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 TRIM25Q14258 630 aaKnown RBP19.96■□□□□ 0.79
C9orf3-215ENST00000478473 ZNF770Q6IQ21 691 aaPredicted RBP19.96■□□□□ 0.79
C9orf3-215ENST00000478473 PGBD2Q6P3X8 592 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 ZNF620Q6ZNG0 422 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 ZBTB46Q86UZ6 589 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 OR4C15Q8NGM1 316 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 ABHD4Q8TB40 342 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 GNPDA2Q8TDQ7 276 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 ERMAPQ96PL5 475 aaPredicted RBP19.96■□□□□ 0.79
C9orf3-215ENST00000478473 CYSLTR2Q9NS75 346 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 PRPF19Q9UMS4 504 aaKnown RBP19.96■□□□□ 0.79
C9orf3-215ENST00000478473 COL6A5A8TX70 2615 aa19.96■□□□□ 0.79
C9orf3-215ENST00000478473 DCTN6O00399 190 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 DOK2O60496 412 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 MPZL1O95297 269 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 PPP1R3DO95685 299 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 IFNA2P01563 188 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 ARHGDIAP52565 204 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 ALKBH6Q3KRA9 238 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 DNM1P34Q6PK57 102 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 NPEPL1Q8NDH3 523 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 ICA1LQ8NDH6 482 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 MDFIQ99750 246 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 ASH2LQ9UBL3 628 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 B9D1Q9UPM9 204 aa19.95■□□□□ 0.78
C9orf3-215ENST00000478473 MXRA5Q9NR99 2828 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 TGFAP01135 160 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 ZNF81P51508 661 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 CCL8P80075 99 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 TEKQ02763 1124 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 CCDC92Q53HC0 331 aaPredicted RBP19.94■□□□□ 0.78
C9orf3-215ENST00000478473 RPL13AP3Q6NVV1 102 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 CYP2R1Q6VVX0 501 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 OR6V1Q8N148 313 aa19.94■□□□□ 0.78
C9orf3-215ENST00000478473 LINC01356Q8N9X3 169 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms