RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HS3ST5Q8IZT8 346 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 CYB561A3Q8NBI2 242 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 OR10H5Q8NGA6 315 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 OR4Q3Q8NH05 313 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 DDOQ99489 341 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 WACQ9BTA9 647 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 BCL2L14Q9BZR8 327 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 RACGAP1Q9H0H5 632 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 YY1AP1Q9H869 796 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 ARMC1Q9NVT9 282 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 PDP1Q9P0J1 537 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-206ENST00000478214 FBXO9Q9UK97 447 aaPredicted RBP13.39□□□□□ -0.27
HMGA1-206ENST00000478214 FKBP7Q9Y680 259 aa13.39□□□□□ -0.27
HMGA1-206ENST00000478214 TLN2Q9Y4G6 2542 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 ARRDC5A6NEK1 342 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 SGCEO43556 437 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 DOK2O60496 412 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 E2F6O75461 281 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 LY6G6DO95868 133 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 TFP02787 698 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 ALDH3B1P43353 468 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 COX10Q12887 443 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 CLEC9AQ6UXN8 241 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 CD300LDQ6UXZ3 194 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 Q71RC1 249 aaPredicted RBP13.38□□□□□ -0.27
HMGA1-206ENST00000478214 ZBTB46Q86UZ6 589 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 LNX2Q8N448 690 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 OR1J1Q8NGS3 322 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 RAB1BQ9H0U4 201 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 MMADHCQ9H3L0 296 aaPredicted RBP13.38□□□□□ -0.27
HMGA1-206ENST00000478214 TPK1Q9H3S4 243 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 PLEK2Q9NYT0 353 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 EIF3KQ9UBQ5 218 aaKnown RBP13.38□□□□□ -0.27
HMGA1-206ENST00000478214 DNAJB9Q9UBS3 223 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 REV1Q9UBZ9 1251 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
HMGA1-206ENST00000478214 M0R233 179 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 RER1O15258 196 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 TIPRLO75663 272 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 COX5BP10606 129 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 ZNF250P15622 560 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 PRKACGP22612 351 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 HTR5AP47898 357 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 DSCR9P59020 149 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 SLC36A3Q495N2 470 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 CCDC92Q53HC0 331 aaPredicted RBP13.37□□□□□ -0.27
HMGA1-206ENST00000478214 SPATA46Q5T0L3 261 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 RFPL4BQ6ZWI9 263 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 VASH1Q7L8A9 365 aaPredicted RBP13.37□□□□□ -0.27
HMGA1-206ENST00000478214 SLC37A3Q8NCC5 494 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 SLC26A10Q8NG04 563 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 OR2T33Q8NG76 320 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 SYNPRQ8TBG9 265 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 C10orf105Q8TEF2 133 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 FAM168AQ92567 244 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 NTN4Q9HB63 628 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 TAAR3PQ9P1P4 343 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 NDRG4Q9ULP0 352 aaKnown RBP13.37□□□□□ -0.27
HMGA1-206ENST00000478214 BAIAP2Q9UQB8 552 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 LHFPL6Q9Y693 200 aa13.37□□□□□ -0.27
HMGA1-206ENST00000478214 IGLV3-9A0A075B6K5 115 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 A0A1W2PPW3 197 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 H3BN98 237 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 NGFP01138 241 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 PYCR1P32322 319 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 KLF3P57682 345 aaPredicted RBP13.36□□□□□ -0.27
HMGA1-206ENST00000478214 SELENOVP59797 346 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 TEKQ02763 1124 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 GLO1Q04760 184 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 CCNIQ14094 377 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 CRMP1Q14194 572 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 CARTPTQ16568 116 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 ALKBH6Q3KRA9 238 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 C1orf146Q5VVC0 180 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 CORO6Q6QEF8 472 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 IQCF1Q8N6M8 205 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 ABHD4Q8TB40 342 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 ZNRF4Q8WWF5 429 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 SLC7A6Q92536 515 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 C4orf45Q96LM5 186 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 NF1P21359 2839 aa13.36□□□□□ -0.27
HMGA1-206ENST00000478214 A0A096LNT2 108 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 OR6C6A6NF89 314 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 ICMTO60725 284 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 DEAF1O75398 565 aaPredicted RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 HLA-DQA2P01906 255 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 ERCC1P07992 297 aaPredicted RBP13.35□□□□□ -0.27
HMGA1-206ENST00000478214 CSF3P09919 207 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 NAT2P11245 290 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 POU1F1P28069 291 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 MPV17P39210 176 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 PDLIM4P50479 330 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 PPP1CBP62140 327 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 HIST1H3AP68431 136 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 NKPD1Q17RQ9 610 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 HIST2H3PS2Q5TEC6 136 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 CCDC121Q6ZUS5 278 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 HIST2H3AQ71DI3 136 aa13.35□□□□□ -0.27
HMGA1-206ENST00000478214 ASRGL1Q7L266 308 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms