RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 STX18Q9P2W9 335 aaKnown RBP16.87■□□□□ 0.29
PDLIM1-202ENST00000477757 GMNCA6NCL1 334 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 CPSF4LA6NMK7 179 aaKnown RBP16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 BLOC1S5-TXNDC5H3BN57 136 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 FSTL3O95633 263 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 ABHD16AO95870 558 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 CST2P09228 141 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 TUBG1P23258 451 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 PITPNBP48739 271 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 ENTPD8Q5MY95 495 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 ARMC4Q5T2S8 1044 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 LRIF1Q5T3J3 769 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 NLRC3Q7RTR2 1065 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 REC114Q7Z4M0 266 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 ADAMTS16Q8TE57 1224 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 C10orf82Q8WW14 230 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 MPP4Q96JB8 637 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 TMEM246Q9BRR3 403 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 TUBG2Q9NRH3 451 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 TIMM10BQ9Y5J6 103 aa16.86■□□□□ 0.29
PDLIM1-202ENST00000477757 H0YL77 283 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 ZNF205O95201 554 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 PPIBP23284 216 aaKnown RBP16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 SLC6A2P23975 617 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 ZNF404Q494X3 552 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 TTMPQ5BVD1 217 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 SMYD1Q8NB12 490 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 OR6T1Q8NGN1 323 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 TBC1D15Q8TC07 691 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 NSMAFQ92636 917 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 CDADC1Q9BWV3 514 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 INIPQ9NRY2 104 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 TBCCD1Q9NVR7 557 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 CLN8Q9UBY8 286 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 NDRG4Q9ULP0 352 aaKnown RBP16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 SLC7A7Q9UM01 511 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 GMEB1Q9Y692 573 aa16.85■□□□□ 0.29
PDLIM1-202ENST00000477757 TRAPPC13A5PLN9 417 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 NPIPB13A6NJU9 1138 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 NPIPB4C9JG80 1138 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 PHYHO14832 338 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 ENSAO43768 121 aaKnown RBP16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 CYB5R3P00387 301 aaPredicted RBP16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 CSF1P09603 554 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 NR2C1P13056 603 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 LAP3P28838 519 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 PCBD1P61457 104 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 CD47Q08722 323 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 SAMD5Q5TGI4 173 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 TSPYL5Q86VY4 417 aaPredicted RBP16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 ZNF420Q8TAQ5 688 aaPredicted RBP16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 HDAC2Q92769 488 aaKnown RBP16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 MAGEB18Q96M61 343 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 MEPEQ9NQ76 525 aaPredicted RBP16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 KIF17Q9P2E2 1029 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 DOCK11Q5JSL3 2073 aa16.84■□□□□ 0.29
PDLIM1-202ENST00000477757 C22orf46C9J442 243 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 PRB2P02812 416 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 SFTPBP07988 381 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 WDR25Q64LD2 544 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 SLC25A47Q6Q0C1 308 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 FOXL2NBQ6ZUU3 175 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 ZSCAN4Q8NAM6 433 aaPredicted RBP16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 GPR32P1Q8NGA4 272 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 GATAD2BQ8WXI9 593 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 HAVCR1Q96D42 359 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 CMBLQ96DG6 245 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 PCGF1Q9BSM1 259 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 TMEM109Q9BVC6 243 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 IKZF5Q9H5V7 419 aa16.83■□□□□ 0.28
PDLIM1-202ENST00000477757 DNAH3Q8TD57 4116 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 P2RY10O00398 339 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 UBDO15205 165 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 IGHV4-59P01825 116 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 CFHR2P36980 270 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 AQP2P41181 271 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 ERFP50548 548 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 PCBP3P57721 371 aaKnown RBP16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 MPP2Q14168 576 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 DUSP7Q16829 419 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 ZNF181Q2M3W8 571 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 PTOV1Q86YD1 416 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 LDLRAD3Q86YD5 345 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 MEGF10Q96KG7 1140 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 PCDHAC1Q9H158 963 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 C16orf95Q9H693 158 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 ACOXLQ9NUZ1 547 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 VAPAQ9P0L0 249 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 SLAMF8Q9P0V8 285 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 ANGPT4Q9Y264 503 aa16.82■□□□□ 0.28
PDLIM1-202ENST00000477757 TRBV5-3A0A0A0MS03 114 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 CENPVL3A0A0U1RRI6 287 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 COX5BP10606 129 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 KITP10721 976 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 GUCY1A3Q02108 690 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 ENDOGQ14249 297 aaKnown RBP16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 Q6ZSV7 163 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 SYT9Q86SS6 491 aa16.81■□□□□ 0.28
PDLIM1-202ENST00000477757 RBM45Q8IUH3 476 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms