RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 NME2P22392 152 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 GFRA1P56159 465 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PSMA6P60900 246 aaKnown RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 MRPS34P82930 218 aaKnown RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 ECH1Q13011 328 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 CAMK2DQ13557 499 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 IL18Q14116 193 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 INSL4Q14641 139 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 FAM27D1Q5T7N8 215 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 BCL2L15Q5TBC7 163 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 GLT8D1Q68CQ7 371 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ABLIM2Q6H8Q1 611 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 STAC2Q6ZMT1 411 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 TMPRSS7Q7RTY8 843 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SYT9Q86SS6 491 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ZNF554Q86TJ5 538 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 CDH24Q86UP0 819 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 KRTAP1-3Q8IUG1 177 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 CDH26Q8IXH8 852 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 C20orf196Q8IYI0 205 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PRSS35Q8N3Z0 413 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 Q8N402 240 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 GALNT16Q8N428 558 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 MEIOBQ8N635 442 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SAMD12Q8N8I0 201 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 TMEM178AQ8NBL3 297 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 GJC3Q8NFK1 279 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 IL17RDQ8NFM7 739 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 OR5M1Q8NGP8 315 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 TSEN15Q8WW01 171 aaKnown RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 RGP1Q92546 391 aaPredicted RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 HAS2Q92819 552 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ABTB1Q969K4 478 aaPredicted RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 TMEM106AQ96A25 262 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 TMEM45BQ96B21 275 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SLAMF6Q96DU3 332 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ITPKCQ96DU7 683 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ADGRG7Q96K78 797 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 OR2M2Q96R28 347 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 C7orf50Q9BRJ6 194 aaKnown RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 EMC6Q9BV81 110 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 TTTY10Q9BZA0 68 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ABCG5Q9H222 651 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PPIL3Q9H2H8 161 aaKnown RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 NELFAQ9H3P2 528 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ZNF703Q9H7S9 590 aaPredicted RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 GP6Q9HCN6 339 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 ACKR4Q9NPB9 350 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 BRD7Q9NPI1 651 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 POLE4Q9NR33 117 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 SLC17A5Q9NRA2 495 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 PARPBPQ9NWS1 579 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 NPAP1Q9NZP6 1156 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 EMC3Q9P0I2 261 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 GDF2Q9UK05 429 aaPredicted RBP7.05□□□□□ -1.28
VMA21-203ENST00000477649 OR52A1Q9UKL2 312 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 WDR87Q6ZQQ6 2873 aa7.05□□□□□ -1.28
VMA21-203ENST00000477649 IGKV3D-15A0A087WSY6 115 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 A0A0A6YYH2 397 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 A6NJ64 397 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ANXA2P2A6NMY6 339 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 CENPXA8MT69 81 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 PROB1E7EW31 1015 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 PSMD9O00233 223 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 EIF1AYO14602 144 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 TNFSF11O14788 317 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 SMAD9O15198 467 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 PIN1P1O15428 100 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 DHHO43323 396 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 GSTZ1O43708 216 aaPredicted RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 CYTIPO60759 359 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 NCR1O76036 304 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 GLSO94925 669 aaPredicted RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 SYNGR4O95473 234 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 WDPCPO95876 746 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ANXA2P07355 339 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 ERCC1P07992 297 aaPredicted RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 CSF3P09919 207 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ATF1P18846 271 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ELK1P19419 428 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 HSD11B1P28845 292 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 KIR3DL2P43630 455 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 MMP15P51511 669 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 CAV3P56539 151 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 FMODQ06828 376 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 RTP5Q14D33 572 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 TAF13Q15543 124 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 FAM189A2Q15884 450 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 FAM27BQ5VT28 67 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 OR7E24Q6IFN5 339 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 YRDCQ86U90 279 aaKnown RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 LRRTM1Q86UE6 522 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 GGNQ86UU5 652 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 NR2C2APQ86WQ0 139 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 SULF2Q8IWU5 870 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ELMOD2Q8IZ81 293 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 TMEM123Q8N131 208 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 ZFP62Q8NB50 900 aaPredicted RBP7.04□□□□□ -1.28
VMA21-203ENST00000477649 MDS2Q8NDY4 140 aa7.04□□□□□ -1.28
VMA21-203ENST00000477649 PRSS33Q8NF86 280 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms