RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 CDRT15Q96T59 188 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 OPN3Q9H1Y3 402 aaPredicted RBP4.56□□□□□ -1.68
VPS45-207ENST00000477558 FKRPQ9H9S5 495 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 TMEM27Q9HBJ8 222 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 C20orf141Q9NUB4 165 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 TMEM160Q9NX00 188 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 ADPRHL2Q9NX46 363 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 MRPL39Q9NYK5 338 aaKnown RBP4.56□□□□□ -1.68
VPS45-207ENST00000477558 ADA2Q9NZK5 511 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 EMC3Q9P0I2 261 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 NLKQ9UBE8 527 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 SEC14L4Q9UDX3 406 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 KCNN3Q9UGI6 736 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 RIMS3Q9UJD0 308 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 RPS6KA6Q9UK32 745 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 SLC13A4Q9UKG4 626 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 SLC7A7Q9UM01 511 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 CLEC4AQ9UMR7 237 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 SAMD4AQ9UPU9 718 aaKnown RBP4.56□□□□□ -1.68
VPS45-207ENST00000477558 ENPP4Q9Y6X5 453 aa4.56□□□□□ -1.68
VPS45-207ENST00000477558 EEF1E1-BLOC1S5C9J1V9 151 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 LRRN3E7EW58 273 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 SOCS2O14508 198 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 EEF1E1O43324 174 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 AKR7A3O95154 331 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ZNF682O95780 498 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 HPRP00739 348 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 MT-ND1P03886 318 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 LCKP06239 509 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TFPIP10646 304 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 CCNA2P20248 432 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 LMO1P25800 156 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 LOXP28300 417 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 GRPRP30550 384 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 RPS5P46782 204 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 SIRPAP78324 504 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 MS4A2Q01362 244 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ST3GAL3Q11203 375 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ZP4Q12836 540 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 P2RY6Q15077 328 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 OR7A5Q15622 319 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ODF3L2Q3SX64 289 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ALG10Q5BKT4 473 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 OTUD3Q5T2D3 398 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 CREB3L2Q70SY1 520 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ASRGL1Q7L266 308 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 GALNT5Q7Z7M9 940 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 NKAIN4Q8IVV8 208 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 WDFY1Q8IWB7 410 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TMEM123Q8N131 208 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 CNEP1R1Q8N9A8 125 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 SLC7A13Q8TCU3 470 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 SLC26A7Q8TE54 656 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FAM222BQ8WU58 562 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TMEM255BQ8WV15 326 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TMEM239Q8WW34 195 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ACOT11Q8WXI4 607 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 POP5Q969H6 163 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 NSMCE2Q96MF7 247 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ZNF385AQ96PM9 386 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 EPYCQ99645 322 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 RBM24Q9BX46 236 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 LINC00470Q9BZP3 86 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 LRMDAQ9H2I8 198 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 MAGIXQ9H6Y5 334 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 MAP6D1Q9H9H5 199 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 IL1RAPQ9NPH3 570 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 RPS6KB2Q9UBS0 482 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ZNF229Q9UJW7 825 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PROCRQ9UNN8 238 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 RASD1Q9Y272 281 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PRRC2AP48634 2157 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 A0A087WUU8 490 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TCRBV3S1A0A5B6 114 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FAM90A7PA6NKC0 464 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 SH2D7A6NKC9 451 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 ENO4A6NNW6 628 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FAM90A22PA8MWA6 464 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FAM90A12PA8MX19 464 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FAM90A23PA8MXZ1 464 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 MS4A18H0YCH9 400 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 RPL36A-HNRNPH2H7BZ11 118 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PLPP3O14495 311 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PDE5AO76074 875 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PLGP00747 810 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 IGHMP01871 453 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ZNF26P17031 533 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 TCN1P20061 433 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 IGHV1-2P23083 117 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 ZNF133P52736 654 aaPredicted RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 OR2B6P58173 313 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TAS2R41P59536 307 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PRKCDQ05655 676 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 PUDPQ08623 228 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FAM27E3Q08E93 113 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 TRAP1Q12931 704 aaKnown RBP4.55□□□□□ -1.68
VPS45-207ENST00000477558 TRAM2Q15035 370 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 STK11Q15831 433 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 MS4A18Q3C1V0 323 aa4.55□□□□□ -1.68
VPS45-207ENST00000477558 FBXW9Q5XUX1 488 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms