RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 UFD1Q92890 307 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TOMM40LQ969M1 308 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 NEIL2Q969S2 332 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FAF2Q96CS3 445 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CCDC42Q96M95 316 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 NOL4LQ96MY1 436 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RILPQ96NA2 401 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 WFIKKN1Q96NZ8 548 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RCHY1Q96PM5 261 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RNF2Q99496 336 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 NKX3-1Q99801 234 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SLC25A33Q9BSK2 321 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MRPS26Q9BYN8 205 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 C6orf62Q9GZU0 229 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 NAA50Q9GZZ1 169 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR51B6Q9H340 312 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FNDC4Q9H6D8 234 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SP140LQ9H930 580 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 PLEKHA1Q9HB21 404 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 NMUR1Q9HB89 426 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TMBIM4Q9HC24 238 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZBTB20Q9HC78 741 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZFP64Q9NPA5 681 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ASCL3Q9NQ33 180 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CLN6Q9NWW5 311 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RHBDL2Q9NX52 303 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TAS2R7Q9NYW3 318 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 EIF3KQ9UBQ5 218 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 B4GALT7Q9UBV7 327 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 KCNG2Q9UJ96 466 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 AGO1Q9UL18 857 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FAF1Q9UNN5 650 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 PPP1R3CQ9UQK1 317 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ASF1AQ9Y294 204 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR2W1Q9Y3N9 320 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 A0A0G2JMZ2 1700 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SMCHD1A6NHR9 2005 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 APC2O95996 2303 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 KIF24Q5T7B8 1368 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 NFAT5O94916 1531 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ITGB4P16144 1822 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ABCB11O95342 1321 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MAPK8IP3Q9UPT6 1336 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DMXL2Q8TDJ6 3036 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CHD9Q3L8U1 2897 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 GLYATL1P3A0A0U1RQE8 302 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 A0A1W2PR80 420 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 A0A1W2PRG6 482 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 TRDCB7Z8K6 153 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FTCDNL1E5RQL4 147 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 NEDD8-MDP1E9PL57 170 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 G3V3Y1 287 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 H3BMQ9 156 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CDC7O00311 574 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 HSD17B6O14756 317 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CRXO43186 299 aaPredicted RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MPDU1O75352 247 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CLDN11O75508 207 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 UTS2O95399 124 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CLDN14O95500 239 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 C1orf105O95561 183 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 HPP00738 406 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 TIMP1P01033 207 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 IFNA14P01570 189 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 HLA-AP01891 365 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 HBE1P02100 147 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 ORM1P02763 201 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 LGALS2P05162 132 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FGF1P05230 155 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 FABP1P07148 127 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RPS17P08708 135 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 OR4E1P0C645 316 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MED14OSP0DP75 135 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 COX5BP10606 129 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 HIST1H1CP16403 213 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 SERPINA2P20848 420 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DTYMKP23919 212 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 LMO1P25800 156 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CAPZBP47756 277 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RFX5P48382 616 aaPredicted RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 AMTP48728 403 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RARRES1P49788 294 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 GNG10P50151 68 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 GAS1P54826 345 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 DLX5P56178 289 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 RIPK4P57078 832 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 TAS2R39P59534 338 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CXCR4P61073 352 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 STXBP1P61764 594 aaKnown RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MGAT3Q09327 533 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF155Q12901 538 aaPredicted RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 UNC119Q13432 240 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 OR5I1Q13606 314 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 TPBGQ13641 420 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 LAGE3Q14657 143 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF169Q14929 603 aaPredicted RBP2.46□□□□□ -2.02
HMGN4-202ENST00000477243 PDK2Q15119 407 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CD226Q15762 336 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 CCDC6Q16204 474 aa2.46□□□□□ -2.02
HMGN4-202ENST00000477243 MLANAQ16655 118 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms