RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LEMD1Q68G75 181 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 DMKNQ6E0U4 476 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR52W1Q6IF63 320 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FAM45BPQ6NSW5 357 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NANOGP8Q6NSW7 305 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NIPAL3Q6P499 406 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FAM159AQ6UWV7 190 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 UNQ9370/PRO34162Q6UXP9 181 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 B3GLCTQ6Y288 498 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SIGLEC15Q6ZMC9 328 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ACOT7LQ6ZUV0 252 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 IL17RELQ6ZVW7 336 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 G2E3Q7L622 706 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 DPY19L4Q7Z388 723 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TMED4Q7Z7H5 227 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 GALNT10Q86SR1 603 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SLC22A16Q86VW1 577 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 UNC93AQ86WB7 457 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LRRC28Q86X40 367 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 RNF130Q86XS8 419 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PTOV1Q86YD1 416 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CTAGE3PQ8IX95 158 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C4orf19Q8IY42 314 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LGI3Q8N145 548 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C9orf62Q8N4C0 152 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LRRC75AQ8NAA5 344 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR2T12Q8NG77 320 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR11H1Q8NG94 326 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR4M2Q8NGB6 313 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR4K2Q8NGD2 314 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR5L1Q8NGL2 311 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR10K1Q8NGX5 313 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR10X1Q8NGY0 326 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR6K3Q8NGY3 331 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR11H2Q8NH07 326 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SAP25Q8TEE9 199 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TRUB1Q8WWH5 349 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 RASL10AQ92737 203 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 IGSF8Q969P0 613 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MCHR2Q969V1 340 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CREB3L1Q96BA8 519 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C12orf43Q96C57 262 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 ZHX1-C8orf76Q96EF9 292 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 WDR34Q96EX3 536 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OTUB1Q96FW1 271 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 MED8Q96G25 268 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SFRP2Q96HF1 295 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MAGEB18Q96M61 343 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NOL4LQ96MY1 436 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 VSTM2LQ96N03 204 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SPATA33Q96N06 139 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ACCSQ96QU6 501 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ERGIC2Q96RQ1 377 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 VAT1Q99536 393 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LPAR4Q99677 370 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 DCUN1D5Q9BTE7 237 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FTHL17Q9BXU8 183 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ULBP2Q9BZM5 246 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 WWTR1Q9GZV5 400 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ARV1Q9H2C2 271 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PPIL3Q9H2H8 161 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 MIXL1Q9H2W2 232 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 EGLN3Q9H6Z9 239 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PLEKHA1Q9HB21 404 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RAB18Q9NP72 206 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 AGPAT4Q9NRZ5 378 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 DDIT4Q9NX09 232 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NUDT4Q9NZJ9 180 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RCC2Q9P258 522 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 COPS7AQ9UBW8 275 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR14J1Q9UGF5 321 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RSL24D1Q9UHA3 163 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 ZNF391Q9UJN7 358 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PITPNC1Q9UKF7 332 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CELA1Q9UNI1 258 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 B9D1Q9UPM9 204 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FOXJ3Q9UPW0 622 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NEU3Q9UQ49 428 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TNNQ9UQP3 1299 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CMAHPQ9Y471 501 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RNF115Q9Y4L5 304 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PPIAL4AQ9Y536 164 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ADGRL2O95490 1459 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 GRIN2BQ13224 1484 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MLH3Q9UHC1 1453 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CAMTA1Q9Y6Y1 1673 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 AFF2P51816 1311 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 WDR62O43379 1518 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 EPRSP07814 1512 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 UGGT2Q9NYU1 1516 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 KIAA1551Q9HCM1 1747 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CNTNAP1P78357 1384 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 TMEM2Q9UHN6 1383 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 MYO5BQ9ULV0 1848 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 KIF14Q15058 1648 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 ABCA5Q8WWZ7 1642 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 NAIPQ13075 1403 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 YTHDC2Q9H6S0 1430 aaKnown RBP2.1□□□□□ -2.07
XRN1-211ENST00000477237 CCDC88BA6NC98 1476 aa2.1□□□□□ -2.07
XRN1-211ENST00000477237 NCOA2Q15596 1464 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms