RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ARHGDIAP52565 204 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 FXYD6P3P58550 94 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 PPP1CBP62140 327 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 LSM6P62312 80 aaKnown RBP9.18□□□□□ -0.94
SEC13-214ENST00000476597 SCRN3Q0VDG4 424 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 KRT72Q14CN4 511 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 KRTAP24-1Q3LI83 254 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 FGD3Q5JSP0 725 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 ARL9Q6T311 187 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 DPY19L2P2Q6ZN68 376 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 RFPL4BQ6ZWI9 263 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 USP51Q70EK9 711 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 ZER1Q7Z7L7 766 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 GLCCI1Q86VQ1 547 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 OR52J3Q8NH60 311 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 TMEM186Q96B77 213 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 RASD2Q96D21 266 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 RSRC1Q96IZ7 334 aaKnown RBP9.18□□□□□ -0.94
SEC13-214ENST00000476597 NSRP1Q9H0G5 558 aaKnown RBP9.18□□□□□ -0.94
SEC13-214ENST00000476597 SYT4Q9H2B2 425 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 SAP30LQ9HAJ7 183 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 TUBG2Q9NRH3 451 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 CYSLTR2Q9NS75 346 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 TBCCD1Q9NVR7 557 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 CD300AQ9UGN4 299 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 IL20RAQ9UHF4 553 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 AURKCQ9UQB9 309 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 COA3Q9Y2R0 106 aaPredicted RBP9.18□□□□□ -0.94
SEC13-214ENST00000476597 IER3IP1Q9Y5U9 82 aa9.18□□□□□ -0.94
SEC13-214ENST00000476597 PLSCR5A0PG75 271 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 UNC119BA6NIH7 251 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 ZSCAN5BA6NJL1 495 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 IMPA2O14732 288 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 TPD52L2O43399 206 aaKnown RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 SGCEO43556 437 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 SPRY3O43610 288 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 MSMBP08118 114 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 SRP14P37108 136 aaKnown RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 CDKN2AP42771 156 aaKnown RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 RPS6KA3P51812 740 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 SMIM11AP58511 58 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 MVKQ03426 396 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 PSG7Q13046 419 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 KRR1Q13601 381 aaKnown RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 KCNMB1Q16558 191 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 HFEQ30201 348 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 RFX4Q33E94 735 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 AVPI1Q5T686 147 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 PTCHD4Q6ZW05 846 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 VASH1Q7L8A9 365 aaPredicted RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 PIGWQ7Z7B1 504 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 GLB1L2Q8IW92 636 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 OR51F2Q8NH61 342 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 ELMOD3Q96FG2 381 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 DIRC2Q96SL1 478 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 CDRT15Q96T59 188 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 NUAK2Q9H093 628 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 KRCC1Q9NPI7 259 aaPredicted RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 HIF1ANQ9NWT6 349 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 CGGBP1Q9UFW8 167 aaPredicted RBP9.17□□□□□ -0.94
SEC13-214ENST00000476597 MAGEL2Q9UJ55 1249 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 ZDHHC8Q9ULC8 765 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 WIPI2Q9Y4P8 454 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 CACNG2Q9Y698 323 aa9.17□□□□□ -0.94
SEC13-214ENST00000476597 OR6C6A6NF89 314 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 SOCS2O14508 198 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 DOK2O60496 412 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 DEAF1O75398 565 aaPredicted RBP9.16□□□□□ -0.94
SEC13-214ENST00000476597 UBOX5O94941 541 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 GADD45GO95257 159 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 MPZL1O95297 269 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ABHD16AO95870 558 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 CD55P08174 381 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ANPEPP15144 967 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 KITLGP21583 273 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 MSX2P35548 267 aaPredicted RBP9.16□□□□□ -0.94
SEC13-214ENST00000476597 HTR5AP47898 357 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 GYS2P54840 703 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
SEC13-214ENST00000476597 CDK5R2Q13319 367 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 AQP6Q13520 282 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 CCDC92Q53HC0 331 aaPredicted RBP9.16□□□□□ -0.94
SEC13-214ENST00000476597 MTX3Q5HYI7 312 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 SAMD4BQ5PRF9 694 aaKnown RBP9.16□□□□□ -0.94
SEC13-214ENST00000476597 LIPNQ5VXI9 398 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 OTPQ5XKR4 325 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ACSM5Q6NUN0 579 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 SMARCD3Q6STE5 483 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ADCK1Q86TW2 530 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 PGAM4Q8N0Y7 254 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 RFLNBQ8N5W9 214 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 CCL17Q92583 94 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 RAB1CQ92928 201 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 CMBLQ96DG6 245 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 NSMCE2Q96MF7 247 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 LRRC37BQ96QE4 947 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 EGLN1Q9GZT9 426 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 RERGLQ9H628 205 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 ZNF665Q9H7R5 613 aa9.16□□□□□ -0.94
SEC13-214ENST00000476597 LPAR2Q9HBW0 351 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms