RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 CSMD2Q7Z408 3487 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 E7EQL1 145 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 PRKYO43930 277 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 SNAP29O95721 258 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 COX5BP10606 129 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 CDC42P60953 191 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 KEAP1Q14145 624 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 SLC35D3Q5M8T2 416 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 B3GLCTQ6Y288 498 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 CDH24Q86UP0 819 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 TCEANCQ8N8B7 351 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 NUP37Q8NFH4 326 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 DHRS9Q9BPW9 319 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 GRIP2Q9C0E4 1043 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 CYB5R1Q9UHQ9 305 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 DSCAMO60469 2012 aa25.59■■□□□ 1.69
HOXB3-208ENST00000476342 TLX2O43763 284 aaPredicted RBP25.58■■□□□ 1.69
HOXB3-208ENST00000476342 TMCC2O75069 709 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 RAF1P04049 648 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 GGT2P36268 569 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 GDI2P50395 445 aaKnown RBP25.58■■□□□ 1.69
HOXB3-208ENST00000476342 RPS7P62081 194 aaKnown RBP25.58■■□□□ 1.69
HOXB3-208ENST00000476342 LRRC36Q1X8D7 754 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 ZNF544Q6NX49 715 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 LYPD4Q6UWN0 246 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 ZNF511Q8NB15 262 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 TMEM163Q8TC26 289 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 HRASLS5Q96KN8 279 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 RDH12Q96NR8 316 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 TOR3AQ9H497 397 aa25.58■■□□□ 1.69
HOXB3-208ENST00000476342 RER1O15258 196 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 CCL2P13500 99 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 PEX2P28328 305 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 GSTT1P30711 240 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 HTR5AP47898 357 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 ENTPD1P49961 510 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 RAB35Q15286 201 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 LPCAT4Q643R3 524 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 KRT80Q6KB66 452 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 VASH1Q7L8A9 365 aaPredicted RBP25.57■■□□□ 1.68
HOXB3-208ENST00000476342 LINC00346Q8IVM7 164 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 SMAP2Q8WU79 429 aaPredicted RBP25.57■■□□□ 1.68
HOXB3-208ENST00000476342 CA10Q9NS85 328 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 ATPIF1Q9UII2 106 aa25.57■■□□□ 1.68
HOXB3-208ENST00000476342 C5orf49A4QMS7 147 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 CCNOP22674 350 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 NR4A1P22736 598 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 DNASE1P24855 282 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 HIST1H3AP68431 136 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 EFNB1P98172 346 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 HGFACQ04756 655 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 SNTB2Q13425 540 aaKnown RBP25.56■■□□□ 1.68
HOXB3-208ENST00000476342 HIST2H3PS2Q5TEC6 136 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 SLC18B1Q6NT16 456 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 CORO6Q6QEF8 472 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 HIST2H3AQ71DI3 136 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 PACRGLQ8N7B6 248 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 BBS1Q8NFJ9 593 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 NINJ1Q92982 152 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 POM121L2Q96KW2 1035 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 INTS14Q96SY0 518 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 HDHD2Q9H0R4 259 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 WDR76Q9H967 626 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 IMPAD1Q9NX62 359 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 H2AFY2Q9P0M6 372 aaPredicted RBP25.56■■□□□ 1.68
HOXB3-208ENST00000476342 GDF2Q9UK05 429 aaPredicted RBP25.56■■□□□ 1.68
HOXB3-208ENST00000476342 PLEKHA6Q9Y2H5 1048 aa25.56■■□□□ 1.68
HOXB3-208ENST00000476342 M0R129 80 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 CASQ2O14958 399 aaPredicted RBP25.55■■□□□ 1.68
HOXB3-208ENST00000476342 SLC2A5P22732 501 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 FABP6P51161 128 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 CCDC92Q53HC0 331 aaPredicted RBP25.55■■□□□ 1.68
HOXB3-208ENST00000476342 LCN1P1Q5VSP4 162 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 NXNL2Q5VZ03 156 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 ERI1Q8IV48 349 aaKnown RBP25.55■■□□□ 1.68
HOXB3-208ENST00000476342 FBXL14Q8N1E6 418 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 OR8J1Q8NGP2 316 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 FAM81AQ8TBF8 368 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 ZMYND19Q96E35 227 aaPredicted RBP25.55■■□□□ 1.68
HOXB3-208ENST00000476342 IL4I1Q96RQ9 567 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 MBOAT4Q96T53 435 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 CCL19Q99731 98 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 SMPD3Q9NY59 655 aaPredicted RBP25.55■■□□□ 1.68
HOXB3-208ENST00000476342 RTTNQ86VV8 2226 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 CSMD1Q96PZ7 3565 aa25.55■■□□□ 1.68
HOXB3-208ENST00000476342 LOC100509620A0A075B734 347 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 CYSRT1A8MQ03 144 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 VSTM5A8MXK1 200 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 ZNF593O00488 134 aaPredicted RBP25.54■■□□□ 1.68
HOXB3-208ENST00000476342 SYNGR3O43761 229 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 SPARCP09486 303 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 APOBEC3AP31941 199 aaPredicted RBP25.54■■□□□ 1.68
HOXB3-208ENST00000476342 RPS23P62266 143 aaKnown RBP25.54■■□□□ 1.68
HOXB3-208ENST00000476342 NKX6-1P78426 367 aaPredicted RBP25.54■■□□□ 1.68
HOXB3-208ENST00000476342 APOFQ13790 326 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 TEX30Q5JUR7 227 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 ELFN2Q5R3F8 820 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 GALNT4Q8N4A0 578 aa25.54■■□□□ 1.68
HOXB3-208ENST00000476342 PAQR4Q8N4S7 273 aaPredicted RBP25.54■■□□□ 1.68
HOXB3-208ENST00000476342 ZNF442Q9H7R0 627 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms