RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 EIF3KQ9UBQ5 218 aaKnown RBP18.1■□□□□ 0.49
LIME1-204ENST00000476183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.09■□□□□ 0.495e-7■■□□□ 14.4
LIME1-204ENST00000476183 IGLV1-36A0A0B4J1U3 117 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 DOK2O60496 412 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 ICMTO60725 284 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 CCNB2O95067 398 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 GASTP01350 101 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 GAAP10253 952 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 MPV17P39210 176 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 SELENOVP59797 346 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 LSM6P62312 80 aaKnown RBP18.09■□□□□ 0.49
LIME1-204ENST00000476183 GLO1Q04760 184 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 SCRN3Q0VDG4 424 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 RIN1Q13671 783 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 KCNMB1Q16558 191 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 FAM98BQ52LJ0 330 aaKnown RBP18.09■□□□□ 0.49
LIME1-204ENST00000476183 CLEC12AQ5QGZ9 265 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 C6orf52Q5T4I8 152 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 OR2T5Q6IEZ7 315 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 VASH1Q7L8A9 365 aaPredicted RBP18.09■□□□□ 0.49
LIME1-204ENST00000476183 JAZF1Q86VZ6 243 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 OR6V1Q8N148 313 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 OR2T29Q8NH02 315 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 ABHD4Q8TB40 342 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 SLC25A40Q8TBP6 338 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 PLA2G12AQ9BZM1 189 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 OR2J1Q9GZK6 312 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 ASH2LQ9UBL3 628 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 NDRG4Q9ULP0 352 aaKnown RBP18.09■□□□□ 0.49
LIME1-204ENST00000476183 B9D1Q9UPM9 204 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 CDH10Q9Y6N8 788 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 U3KQV3 271 aa18.09■□□□□ 0.49
LIME1-204ENST00000476183 SGCEO43556 437 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 CRLF1O75462 422 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 IGHV3-13P01766 116 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 COX5BP10606 129 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 COL8A2P25067 703 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 CRABP1P29762 137 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 MAGEB1P43366 347 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 AQP6Q13520 282 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 MEP1BQ16820 701 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 CCDC92Q53HC0 331 aaPredicted RBP18.08■□□□□ 0.48
LIME1-204ENST00000476183 SLC35F1Q5T1Q4 408 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 ADGRG5Q8IZF4 528 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 LINC00471Q8N535 108 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 ZNF540Q8NDQ6 660 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 SDR9C7Q8NEX9 313 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 OR8D4Q8NGM9 314 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 IPCEF1Q8WWN9 437 aaPredicted RBP18.08■□□□□ 0.48
LIME1-204ENST00000476183 SLC7A6Q92536 515 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 SLC7A6OSQ96CW6 309 aaPredicted RBP18.08■□□□□ 0.48
LIME1-204ENST00000476183 C4orf45Q96LM5 186 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 LRGUKQ96M69 825 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 SNX18Q96RF0 628 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 FN3KQ9H479 309 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 SRA1Q9HD15 236 aaKnown RBP18.08■□□□□ 0.48
LIME1-204ENST00000476183 HINT3Q9NQE9 182 aaKnown RBP18.08■□□□□ 0.48
LIME1-204ENST00000476183 SLCO1C1Q9NYB5 712 aa18.08■□□□□ 0.48
LIME1-204ENST00000476183 SAMHD1Q9Y3Z3 626 aaKnown RBP18.08■□□□□ 0.48
LIME1-204ENST00000476183 OR6C68A6NDL8 312 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 C17orf100A8MU93 164 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 IDH3BO43837 385 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 LILRA1O75019 489 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 RAP2AP10114 183 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 HTR5AP47898 357 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 CENPAP49450 140 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 PPP1CBP62140 327 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 TRAP1Q12931 704 aaKnown RBP18.07■□□□□ 0.48
LIME1-204ENST00000476183 ZNF718Q3SXZ3 478 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 MBNL2Q5VZF2 373 aaKnown RBP18.07■□□□□ 0.48
LIME1-204ENST00000476183 PGM2L1Q6PCE3 622 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.07■□□□□ 0.48
LIME1-204ENST00000476183 PRIMA1Q86XR5 153 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 AQP11Q8NBQ7 271 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 NPEPL1Q8NDH3 523 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 KLF14Q8TD94 323 aaPredicted RBP18.07■□□□□ 0.48
LIME1-204ENST00000476183 YIPF5Q969M3 257 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 RACGAP1Q9H0H5 632 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 POFUT1Q9H488 388 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 RPRD1BQ9NQG5 326 aaKnown RBP18.07■□□□□ 0.48
LIME1-204ENST00000476183 PLEK2Q9NYT0 353 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 IL20Q9NYY1 176 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 LHFPL6Q9Y693 200 aa18.07■□□□□ 0.48
LIME1-204ENST00000476183 LRP5LA4QPB2 252 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 OR6C6A6NF89 314 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 A8MV72 311 aaPredicted RBP18.06■□□□□ 0.48
LIME1-204ENST00000476183 BHLHE40O14503 412 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 RER1O15258 196 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 RENP00797 406 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 ZNF16P17020 682 aaPredicted RBP18.06■□□□□ 0.48
LIME1-204ENST00000476183 ZNF23P17027 643 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 NOS3P29474 1203 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 TRIP10Q15642 601 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 MICAQ29983 383 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 CYB5R2Q6BCY4 276 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 DNM1P34Q6PK57 102 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 RASSF6Q6ZTQ3 369 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 ZBTB46Q86UZ6 589 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 OR52E2Q8NGJ4 325 aa18.06■□□□□ 0.48
LIME1-204ENST00000476183 SNX33Q8WV41 574 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms