RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 VN1R3Q9BXE9 311 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 FAM234AQ9H0X4 552 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SLC22A11Q9NSA0 550 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 TRBV4-1A0A0J9YWV2 114 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 TCRBV21S2A2A0A5A6 115 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 C17orf105B2RV13 164 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 GABRPO00591 440 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ANKRD34CP0C6C1 535 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 FOLR3P41439 243 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 GATMP50440 423 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 COL4A4P53420 1690 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SUB1P53999 127 aaKnown RBP eCLIP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ILKQ13418 452 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF239Q16600 458 aaKnown RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 MEP1BQ16820 701 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF542PQ5EBM4 170 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 B3GNTL1Q67FW5 361 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 BTNL8Q6UX41 500 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 CLEC1AQ8NC01 280 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 OR1M1Q8NGA1 313 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 KIRREL1Q96J84 757 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 MYO7AQ13402 2215 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SH2D7A6NKC9 451 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 KDM4EB2RXH2 506 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 HPP00738 406 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SCGB1C2P0DMR2 95 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 AADACP22760 399 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 AHRP35869 848 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 LMAN2Q12907 356 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 MFAP5Q13361 173 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SYT14P1Q58G82 188 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 CD300LGQ6UXG3 332 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 FAM185AQ8N0U4 392 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ADOQ96SZ5 270 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SLC25A21Q9BQT8 299 aaPredicted RBP10.57□□□□□ -0.72
U2AF1-209ENST00000475639 PLEKHF2Q9H8W4 249 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 PELI2Q9HAT8 420 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 CA10Q9NS85 328 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ZFP92A6NM28 416 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 NTSR1P30989 418 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 PGFP49763 221 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 MVDP53602 400 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 CTSCP53634 463 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 HCCSP53701 268 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 RAG2P55895 527 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 GABREP78334 506 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 COX20Q5RI15 118 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 IER5LQ5T953 404 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 C14orf79Q96F83 325 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 CCDC74BQ96LY2 380 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 ABHD6Q9BV23 337 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SGPP1Q9BX95 441 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SLC12A9Q9BXP2 914 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 SLC17A9Q9BYT1 436 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 NMES1Q9C002 83 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 PLK3Q9H4B4 646 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 NOX4Q9NPH5 578 aa10.57□□□□□ -0.72
U2AF1-209ENST00000475639 TMEM129A0AVI4 362 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 XKRY2A2RUG3 117 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 BLACEA4D250 179 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 PMS2P1A4D2B8 440 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 FRS3O43559 492 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 RECKO95980 971 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 GABRA1P14867 456 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 MST1P26927 711 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 SPINT3P49223 89 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 BIDP55957 195 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 POU3F1Q03052 451 aaPredicted RBP10.56□□□□□ -0.72
U2AF1-209ENST00000475639 HIST2H3AQ71DI3 136 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 MEPCEQ7L2J0 689 aaKnown RBP10.56□□□□□ -0.72
U2AF1-209ENST00000475639 SLC35G3Q8N808 338 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 OR1J2Q8NGS2 313 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 TVP23CQ96ET8 276 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 NUDT22Q9BRQ3 303 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 SELENOIQ9C0D9 397 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 LINC00597Q9H2U6 94 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 PIGMQ9H3S5 423 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 C1GALT1Q9NS00 363 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 SLC35D1Q9NTN3 355 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 ZNF337Q9Y3M9 751 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 LRIT2A6NDA9 550 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 ARRDC5A6NEK1 342 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 FFAR1O14842 300 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 B4GALT3O60512 393 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 FZD7O75084 574 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 OR1D4P47884 311 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 HTR5AP47898 357 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 PDZK1IP1Q13113 114 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 HYAL4Q2M3T9 481 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 PGGHGQ32M88 737 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 MARCH8Q5T0T0 291 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 MDGA2Q7Z553 956 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 TMEM217Q8N7C4 229 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 FLVCR2Q9UPI3 526 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 GATCO43716 136 aaKnown RBP10.56□□□□□ -0.72
U2AF1-209ENST00000475639 C5AR1P21730 350 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 HES1Q14469 280 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 DEFB110Q30KQ9 67 aa10.56□□□□□ -0.72
U2AF1-209ENST00000475639 HENMT1Q5T8I9 393 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms