RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ACSM3Q53FZ2 586 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 YIF1BQ5BJH7 314 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 FAM180AQ6UWF9 173 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 CFAP77Q6ZQR2 320 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 CEACAM19Q7Z692 300 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.11□□□□□ -0.47
TRAF4-210ENST00000475329 OR5AK2Q8NH90 309 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 MCFD2Q8NI22 146 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 SNRNP27Q8WVK2 155 aaKnown RBP12.11□□□□□ -0.47
TRAF4-210ENST00000475329 HTRA1Q92743 480 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 APH1AQ96BI3 265 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 DACH2Q96NX9 599 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF416Q9BWM5 594 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 SLIRPQ9GZT3 109 aaKnown RBP12.11□□□□□ -0.47
TRAF4-210ENST00000475329 GLRX2Q9NS18 164 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 CENPMQ9NSP4 180 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 TMEM38BQ9NVV0 291 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 FRRS1LQ9P0K9 344 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 ASH2LQ9UBL3 628 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 R4GMQ9 66 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 A3GALT2U3KPV4 340 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 NCOR2Q9Y618 2525 aa12.11□□□□□ -0.47
TRAF4-210ENST00000475329 GTF3C1Q12789 2109 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 A0A087WV48 116 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 OR4C45A6NMZ5 311 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 LOC110117498-PIK3R3F6TDL0 507 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 SC5DO75845 299 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZFPL1O95159 310 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 TGM6O95932 706 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 MYL9P24844 172 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 AGTR1P30556 359 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 SDC2P34741 201 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 RPS19P39019 145 aaKnown RBP12.1□□□□□ -0.47
TRAF4-210ENST00000475329 PEX19P40855 299 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 KIR3DL2P43630 455 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 MTNR1BP49286 362 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 CCR9P51686 369 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 INSL4Q14641 139 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 TAF13Q15543 124 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 WDR38Q5JTN6 314 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 FAM27BQ5VT28 67 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 KLHL24Q6TFL4 600 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 RHOUQ7L0Q8 258 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 LINGO2Q7L985 606 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.1□□□□□ -0.47
TRAF4-210ENST00000475329 CATSPERDQ86XM0 798 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF100Q8IYN0 542 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 PRSS35Q8N3Z0 413 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF676Q8N7Q3 588 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 GJC3Q8NFK1 279 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 OR10S1Q8NGN2 331 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 OR13C5Q8NGS8 318 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 TBC1D15Q8TC07 691 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-210ENST00000475329 GMPPAQ96IJ6 420 aaPredicted RBP12.1□□□□□ -0.47
TRAF4-210ENST00000475329 GPR137Q96N19 417 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 TRIB1Q96RU8 372 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 FOXB1Q99853 325 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 NIPAL2Q9H841 368 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 SLC7A10Q9NS82 523 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 SNTG1Q9NSN8 517 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 LUZP4Q9P127 313 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 FBXL3Q9UKT7 428 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 GTF2A1LQ9UNN4 478 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 PMF1-BGLAPU3KQ54 211 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
TRAF4-210ENST00000475329 DVL2O14641 736 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 CASKO14936 926 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 SS18L1O75177 396 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 SRSF10O75494 262 aaKnown RBP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 ARL6IP5O75915 188 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 WISP2O76076 250 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 CST2P09228 141 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 HSD11B1P28845 292 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 DCTDP32321 178 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 RORCP51449 518 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 RPS11P62280 158 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 GRB2P62993 217 aaKnown RBP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 HIST1H3AP68431 136 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 MXD1Q05195 221 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 MFGE8Q08431 387 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 SF3B4Q15427 424 aaKnown RBP eCLIP12.09□□□□□ -0.474e-8■■■■□ 19.3
TRAF4-210ENST00000475329 ZMAT1Q5H9K5 638 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 HIST2H3PS2Q5TEC6 136 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 HIST2H3AQ71DI3 136 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 NUFIP2Q7Z417 695 aaKnown RBP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 LRRC18Q8N456 261 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 TEX19Q8NA77 164 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 OR5M9Q8NGP3 310 aa12.09□□□□□ -0.47
TRAF4-210ENST00000475329 RGP1Q92546 391 aaPredicted RBP12.09□□□□□ -0.47
TRAF4-210ENST00000475329 PHYHIPQ92561 330 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms