RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 IGHV1-46P01743 117 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 MT-ND1P03886 318 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 F13BP05160 661 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 THRBP10828 461 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 RHCEP18577 417 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 GATA3P23771 443 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 STOMP27105 288 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 GCH1P30793 250 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 ACTR3P61158 418 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 UBA52P62987 128 aaKnown RBP13.25□□□□□ -0.29
SRRT-209ENST00000474896 LCN2P80188 198 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 ST3GAL3Q11203 375 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 KPNB1Q14974 876 aaKnown RBP13.25□□□□□ -0.29
SRRT-209ENST00000474896 ZNF718Q3SXZ3 478 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 PABPC1L2AQ5JQF8 200 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 SPATA46Q5T0L3 261 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 THEM4Q5T1C6 240 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 MPP4Q96JB8 637 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 GAL3ST1Q99999 423 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 NTN4Q9HB63 628 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 DDX28Q9NUL7 540 aaKnown RBP13.25□□□□□ -0.29
SRRT-209ENST00000474896 RHCGQ9UBD6 479 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 EIF3KQ9UBQ5 218 aaKnown RBP13.25□□□□□ -0.29
SRRT-209ENST00000474896 PPIAL4AQ9Y536 164 aa13.25□□□□□ -0.29
SRRT-209ENST00000474896 A0A1W2PRG6 482 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 ISPDA4D126 451 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 MCIDASD6RGH6 385 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 RRP9O43818 475 aaKnown RBP13.24□□□□□ -0.29
SRRT-209ENST00000474896 MGRN1O60291 552 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 TRMUO75648 421 aaKnown RBP13.24□□□□□ -0.29
SRRT-209ENST00000474896 HOXB6P17509 224 aaKnown RBP13.24□□□□□ -0.29
SRRT-209ENST00000474896 CDAP32320 146 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 MPV17P39210 176 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 MMP15P51511 669 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 FAM209AQ5JX71 171 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 NANOGNBQ7Z5D8 188 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 ZNF101Q8IZC7 436 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 DVL3Q92997 716 aaPredicted RBP13.24□□□□□ -0.29
SRRT-209ENST00000474896 SLCO4A1Q96BD0 722 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 MARS2Q96GW9 593 aaKnown RBP13.24□□□□□ -0.29
SRRT-209ENST00000474896 PRSS27Q9BQR3 290 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 ZNF747Q9BV97 191 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 FNDC11Q9BVV2 318 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 CHID1Q9BWS9 393 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 SLC19A3Q9BZV2 496 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 SIAEQ9HAT2 523 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 CCNB1IP1Q9NPC3 277 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 MEPEQ9NQ76 525 aaPredicted RBP13.24□□□□□ -0.29
SRRT-209ENST00000474896 UBAP1Q9NZ09 502 aa13.24□□□□□ -0.29
SRRT-209ENST00000474896 PLSCR5A0PG75 271 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 C5orf49A4QMS7 147 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 TMPRSS2O15393 492 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 FSHBP01225 129 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 H1F0P07305 194 aaKnown RBP13.23□□□□□ -0.29
SRRT-209ENST00000474896 ACADSP16219 412 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 FUT1P19526 365 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 FUT4P22083 530 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 ZFP36P26651 326 aaKnown RBP13.23□□□□□ -0.29
SRRT-209ENST00000474896 WNT5AP41221 380 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 UGT2B15P54855 530 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 SPIBQ01892 262 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 RPL18Q07020 188 aaKnown RBP13.23□□□□□ -0.29
SRRT-209ENST00000474896 SLC3A1Q07837 685 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 FOXL1Q12952 345 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 SGCAQ16586 387 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 TMEM255AQ5JRV8 349 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 NKAIN4Q8IVV8 208 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 PAPD5Q8NDF8 572 aaKnown RBP13.23□□□□□ -0.29
SRRT-209ENST00000474896 NOXO1Q8NFA2 376 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 SLC25A40Q8TBP6 338 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 ST7LQ8TDW4 575 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 ASB10Q8WXI3 467 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 DUS3LQ96G46 650 aaKnown RBP13.23□□□□□ -0.29
SRRT-209ENST00000474896 POM121L2Q96KW2 1035 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 ZNF426Q9BUY5 554 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 EGLN1Q9GZT9 426 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 NMNAT1Q9HAN9 279 aaPredicted RBP13.23□□□□□ -0.29
SRRT-209ENST00000474896 MAN2C1Q9NTJ4 1040 aa13.23□□□□□ -0.29
SRRT-209ENST00000474896 LOC100509620A0A075B734 347 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 CENPBD1B2RD01 187 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 FKBP6O75344 327 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 SLC2A10O95528 541 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 HKR1P10072 659 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 ZNF32P17041 273 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 AQP2P41181 271 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 RBM34P42696 430 aaKnown RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 GDI2P50395 445 aaKnown RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 ZNF133P52736 654 aaPredicted RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 MRPS34P82930 218 aaKnown RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 TRAM2Q15035 370 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 SPRNQ5BIV9 151 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 PRR31Q5SQ13 230 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 C10orf128Q5T292 105 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 MBNL2Q5VZF2 373 aaKnown RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 SHISA2Q6UWI4 295 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 RBMS3Q6XE24 437 aaKnown RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 SIGLECL1Q8N7X8 197 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 AKR7LQ8NHP1 331 aa13.22□□□□□ -0.29
SRRT-209ENST00000474896 KLF14Q8TD94 323 aaPredicted RBP13.22□□□□□ -0.29
SRRT-209ENST00000474896 TMEM255BQ8WV15 326 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms