RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 OR4C15Q8NGM1 316 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 CENPNQ96H22 339 aaPredicted RBP13.02□□□□□ -0.33
VARS-223ENST00000474643 GPX7Q96SL4 187 aaPredicted RBP13.02□□□□□ -0.33
VARS-223ENST00000474643 OR51B6Q9H340 312 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 C1orf198Q9H425 327 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 DCLRE1BQ9H816 532 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 CCNB1IP1Q9NPC3 277 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 NRIP3Q9NQ35 241 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 VNN3Q9NY84 501 aa13.02□□□□□ -0.33
VARS-223ENST00000474643 FBN1P35555 2871 aaKnown RBP13.01□□□□□ -0.33
VARS-223ENST00000474643 ANKRD65E5RJM6 399 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 TPD52L2O43399 206 aaKnown RBP13.01□□□□□ -0.33
VARS-223ENST00000474643 GASTP01350 101 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 MT-ND5P03915 603 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 SERPINA5P05154 406 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 LCKP06239 509 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 PATE4P0C8F1 98 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 PCMT1P22061 227 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 APLNRP35414 380 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 ALDH3B1P43353 468 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 CENPAP49450 140 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 ARHGDIAP52565 204 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 MESTQ5EB52 335 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 RGS7BPQ6MZT1 257 aaPredicted RBP13.01□□□□□ -0.33
VARS-223ENST00000474643 RPL13AP3Q6NVV1 102 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 SLC25A47Q6Q0C1 308 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 OR1J2Q8NGS2 313 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 GIPC3Q8TF64 312 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 PYDC1Q8WXC3 89 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 SIAEQ9HAT2 523 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 TBC1D23Q9NUY8 699 aa13.01□□□□□ -0.33
VARS-223ENST00000474643 IGKV1D-43A0A0B4J1Z2 117 aa13□□□□□ -0.33
VARS-223ENST00000474643 PRSS37A4D1T9 235 aa13□□□□□ -0.33
VARS-223ENST00000474643 LYNX1G3V0Z9 82 aa13□□□□□ -0.33
VARS-223ENST00000474643 H0YHG0 523 aa13□□□□□ -0.33
VARS-223ENST00000474643 AHCYL1O43865 530 aa13□□□□□ -0.33
VARS-223ENST00000474643 RENP00797 406 aa13□□□□□ -0.33
VARS-223ENST00000474643 FAM157BP0CG42 384 aa13□□□□□ -0.33
VARS-223ENST00000474643 LYNX1P0DP58 116 aa13□□□□□ -0.33
VARS-223ENST00000474643 GSTM3P21266 225 aa13□□□□□ -0.33
VARS-223ENST00000474643 CCNOP22674 350 aa13□□□□□ -0.33
VARS-223ENST00000474643 GIFP27352 417 aa13□□□□□ -0.33
VARS-223ENST00000474643 GPR6P46095 362 aaPredicted RBP13□□□□□ -0.33
VARS-223ENST00000474643 ZNF133P52736 654 aaPredicted RBP13□□□□□ -0.33
VARS-223ENST00000474643 FXYD6P3P58550 94 aa13□□□□□ -0.33
VARS-223ENST00000474643 MRPS34P82930 218 aaKnown RBP13□□□□□ -0.33
VARS-223ENST00000474643 MAD2L1BPQ15013 274 aaPredicted RBP13□□□□□ -0.33
VARS-223ENST00000474643 ALKBH6Q3KRA9 238 aa13□□□□□ -0.33
VARS-223ENST00000474643 NRN1LQ496H8 165 aa13□□□□□ -0.33
VARS-223ENST00000474643 CLEC12AQ5QGZ9 265 aa13□□□□□ -0.33
VARS-223ENST00000474643 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
VARS-223ENST00000474643 ZNF620Q6ZNG0 422 aa13□□□□□ -0.33
VARS-223ENST00000474643 ADCK1Q86TW2 530 aa13□□□□□ -0.33
VARS-223ENST00000474643 PHC2Q8IXK0 858 aa13□□□□□ -0.33
VARS-223ENST00000474643 LINC01356Q8N9X3 169 aa13□□□□□ -0.33
VARS-223ENST00000474643 DNAJC9Q8WXX5 260 aa13□□□□□ -0.33
VARS-223ENST00000474643 HPS1Q92902 700 aa13□□□□□ -0.33
VARS-223ENST00000474643 NARFLQ9H6Q4 476 aa13□□□□□ -0.33
VARS-223ENST00000474643 EGLN3Q9H6Z9 239 aa13□□□□□ -0.33
VARS-223ENST00000474643 PDP1Q9P0J1 537 aaPredicted RBP13□□□□□ -0.33
VARS-223ENST00000474643 CDH10Q9Y6N8 788 aa13□□□□□ -0.33
VARS-223ENST00000474643 RTTNQ86VV8 2226 aa13□□□□□ -0.33
VARS-223ENST00000474643 TMEM129A0AVI4 362 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 MGRN1O60291 552 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 SLC16A7O60669 478 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 TIPRLO75663 272 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 ZNF35P13682 527 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 RAD52P43351 418 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 KLF3P57682 345 aaPredicted RBP12.99□□□□□ -0.33
VARS-223ENST00000474643 CR1LQ2VPA4 569 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 SLC35F1Q5T1Q4 408 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 LEG1Q6P5S2 330 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 SHQ1Q6PI26 577 aaKnown RBP12.99□□□□□ -0.33
VARS-223ENST00000474643 DNM1P34Q6PK57 102 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 UNQ6126/PRO20091Q6UXV3 157 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 RASSF6Q6ZTQ3 369 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 PQLC1Q8N2U9 271 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 FGFBP3Q8TAT2 258 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 C11orf40Q8WZ69 217 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 RDH5Q92781 318 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 SYT4Q9H2B2 425 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 ZNF556Q9HAH1 456 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 NTN4Q9HB63 628 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 C8orf4Q9NR00 106 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 TAAR3PQ9P1P4 343 aa12.99□□□□□ -0.33
VARS-223ENST00000474643 SVEP1Q4LDE5 3571 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 IMPA2O14732 288 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 PPIHO43447 177 aaKnown RBP12.98□□□□□ -0.33
VARS-223ENST00000474643 IDH3BO43837 385 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 KHDRBS3O75525 346 aaKnown RBP12.98□□□□□ -0.33
VARS-223ENST00000474643 SOX14O95416 240 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 TXNDC12O95881 172 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 NAT2P11245 290 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 CCL2P13500 99 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 MSR1P21757 451 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 CRABP1P29762 137 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 MOGQ16653 247 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 LIPNQ5VXI9 398 aa12.98□□□□□ -0.33
VARS-223ENST00000474643 ZNF770Q6IQ21 691 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms