RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 CALM1P0DP23 149 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 CALM2P0DP24 149 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 CALM3P0DP25 149 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 ZNF138P52744 262 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 PRMT2P55345 433 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 SLC25A11Q02978 314 aaKnown RBP1.78□□□□□ -2.12
SSB-210ENST00000474273 SRSF5Q13243 272 aaKnown RBP1.78□□□□□ -2.12
SSB-210ENST00000474273 ALKBH6Q3KRA9 238 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 PRAMEF20Q5VT98 475 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 ZFP1Q6P2D0 407 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 RNASEKQ6P5S7 137 aaKnown RBP1.78□□□□□ -2.12
SSB-210ENST00000474273 UNQ9165/PRO28630Q6UXU0 137 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 LRRC52Q8N7C0 313 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 B3GNT7Q8NFL0 401 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 OR8U1Q8NH10 309 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 FAM49BQ9NUQ9 324 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 KLHL28Q9NXS3 571 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 LSM7Q9UK45 103 aaKnown RBP1.78□□□□□ -2.12
SSB-210ENST00000474273 ST3GAL6Q9Y274 331 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 SIGLEC9Q9Y336 463 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 STARD10Q9Y365 291 aa1.78□□□□□ -2.12
SSB-210ENST00000474273 A0A0U1RQV1 116 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 UBXN8O00124 270 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 LGALS9O00182 355 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 BPY2O14599 106 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 C2P06681 752 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 P0C880 135 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 UBTFL6P0CB48 400 aaPredicted RBP1.77□□□□□ -2.13
SSB-210ENST00000474273 NCF2P19878 526 aaPredicted RBP1.77□□□□□ -2.13
SSB-210ENST00000474273 IMMTQ16891 758 aaKnown RBP1.77□□□□□ -2.13
SSB-210ENST00000474273 SAXO2Q658L1 398 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 TMEM205Q6UW68 189 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 GTPBP8Q8N3Z3 284 aaPredicted RBP1.77□□□□□ -2.13
SSB-210ENST00000474273 OR10R2Q8NGX6 335 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 KCNG3Q8TAE7 436 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 ACMSDQ8TDX5 336 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 ZCCHC13Q8WW36 166 aaKnown RBP1.77□□□□□ -2.13
SSB-210ENST00000474273 ELMO1Q92556 727 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 KIFAP3Q92845 792 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 ETNK2Q9NVF9 386 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 UVRAGQ9P2Y5 699 aa1.77□□□□□ -2.13
SSB-210ENST00000474273 KANK1Q14678 1352 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.76□□□□□ -2.13
SSB-210ENST00000474273 IGLV1-36A0A0B4J1U3 117 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 C17orf51A8MQB3 221 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 C16orf90A8MZG2 172 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 F6UB75 175 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 GOLGA8SH3BPF8 625 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 AP3B1O00203 1094 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 EIF3HO15372 352 aaKnown RBP eCLIP1.76□□□□□ -2.13
SSB-210ENST00000474273 NDUFB10O96000 172 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 CD74P04233 296 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 TPM2P07951 284 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 CCNHP51946 323 aaPredicted RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 RND2P52198 227 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 NUTF2P61970 127 aaKnown RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 BEX3Q00994 111 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 GBE1Q04446 702 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 MXD1Q05195 221 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 LRRC74AQ0VAA2 488 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 PON2Q15165 354 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 ZNF726P1Q15940 193 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 SNRNP35Q16560 246 aaKnown RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 ZSCAN26Q16670 478 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 KRTAP6-3Q3LI67 103 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 AP1ARQ63HQ0 302 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 FBXW12Q6X9E4 464 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 RUFY3Q7L099 469 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 UBE2J2Q8N2K1 259 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 OR4K5Q8NGD3 323 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 OR9A2Q8NGT5 310 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 LILRB4Q8NHJ6 448 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 SLC2A14Q8TDB8 520 aa1.76□□□□□ -2.13
SSB-210ENST00000474273 FLYWCH2Q96CP2 140 aaKnown RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 SAV1Q9H4B6 383 aaPredicted RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 RABL2AQ9UBK7 228 aaPredicted RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 AHDC1Q5TGY3 1603 aaPredicted RBP1.76□□□□□ -2.13
SSB-210ENST00000474273 SHANK1Q9Y566 2161 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 NSD2O96028 1365 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 GOLGA8OA6NCC3 632 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 PCP4L1A6NKN8 68 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 VGLL3A8MV65 326 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 GOLGA8NF8WBI6 632 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 BOLA2-SMG1P6H3BVE0 249 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 DNALI1O14645 258 aaPredicted RBP1.75□□□□□ -2.13
SSB-210ENST00000474273 DPM1O60762 260 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 SFTPCP11686 197 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 GPX4P36969 197 aaPredicted RBP1.75□□□□□ -2.13
SSB-210ENST00000474273 ACTG2P63267 376 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 MRPS22P82650 360 aaKnown RBP1.75□□□□□ -2.13
SSB-210ENST00000474273 FLI1Q01543 452 aaPredicted RBP1.75□□□□□ -2.13
SSB-210ENST00000474273 IFT88Q13099 833 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 CLINT1Q14677 625 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 SOHLH1Q5JUK2 328 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 CCDC183Q5T5S1 534 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 ANKRD22Q5VYY1 191 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 LRRC66Q68CR7 880 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 TMEM220Q6QAJ8 160 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 TMEM107Q6UX40 140 aa1.75□□□□□ -2.13
SSB-210ENST00000474273 LRRC74BQ6ZQY2 392 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms