RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 COG8Q96MW5 612 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 OR5M11Q96RB7 305 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 OR8B4Q96RC9 309 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SIGLEC11Q96RL6 698 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SH3GL3Q99963 347 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 HDHD5Q9BXW7 423 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 FAM192AQ9GZU8 254 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 HDHD2Q9H0R4 259 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 SP140LQ9H930 580 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 EXOSC4Q9NPD3 245 aaKnown RBP9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CYB5R1Q9UHQ9 305 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 COPS3Q9UNS2 423 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 UGT2A1Q9Y4X1 527 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 TIMM10BQ9Y5J6 103 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CELSR3Q9NYQ7 3312 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 CACNA1GO43497 2377 aa9.04□□□□□ -0.96
PRPF38A-202ENST00000474048 A0A096LPE4 126 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 TRBV2A0A0J9YWF9 115 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 A0A1W2PPZ6 126 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 LOC110117498-PIK3R3F6TDL0 507 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 J3QRE1 110 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 CCL21O00585 134 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 RAD51DO75771 328 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 IL18BPO95998 194 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 WNT11O96014 354 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 SERPINA3P01011 423 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 SCG5P05408 212 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 CD36P16671 472 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 CELP19835 753 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 CEACAM8P31997 349 aaPredicted RBP9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 CA7P43166 264 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 KIR2DL2P43627 348 aaPredicted RBP9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 HTR5AP47898 357 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ALDH3B2P48448 385 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 OR12D2P58182 307 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 FOXF2Q12947 444 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 RAB35Q15286 201 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 TRAM1Q15629 374 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 CCDC58Q4VC31 144 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ELFN2Q5R3F8 820 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 GPR107Q5VW38 600 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 LIPKQ5VXJ0 399 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 OTPQ5XKR4 325 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 RTL6Q6ICC9 239 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ARL9Q6T311 187 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 SSX6Q7RTT6 188 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 BTLAQ7Z6A9 289 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 COMMD2Q86X83 199 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF676Q8N7Q3 588 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 C1orf162Q8NEQ5 155 aaPredicted RBP9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 OR1K1Q8NGR3 316 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 OR13F1Q8NGS4 319 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 HTRA1Q92743 480 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ATF6BQ99941 703 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 OPN3Q9H1Y3 402 aaPredicted RBP9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 MOB1AQ9H8S9 216 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ELOVL3Q9HB03 270 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 MOV10Q9HCE1 1003 aaKnown RBP9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 PLSCR4Q9NRQ2 329 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ACOXLQ9NUZ1 547 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 ZNF629Q9UEG4 869 aaPredicted RBP9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 FBXL3Q9UKT7 428 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 SSR3Q9UNL2 185 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 LRP12Q9Y561 859 aa9.03□□□□□ -0.96
PRPF38A-202ENST00000474048 DMXL2Q8TDJ6 3036 aa9.02□□□□□ -0.96
PRPF38A-202ENST00000474048 PHF3Q92576 2039 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 A0A1B0GUH1 482 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 OR6C6A6NF89 314 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 MSTNO14793 375 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 TNFSF13O75888 250 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 LYZL6O75951 148 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ANXA2P07355 339 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 NTF4P34130 210 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 APLNRP35414 380 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RGS6P49758 472 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 GP2P55259 537 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 TPTEP56180 551 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 GALK2Q01415 458 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ROM1Q03395 351 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 SLC3A1Q07837 685 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ACSM1Q08AH1 577 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 MRPL49Q13405 166 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ENDOGQ14249 297 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 GUSBP1Q15486 140 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 PCK2Q16822 640 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 GSG1Q2KHT4 349 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 BCL2L15Q5TBC7 163 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RPL22L1Q6P5R6 122 aaKnown RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RHOUQ7L0Q8 258 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 BHLHA15Q7RTS1 189 aaPredicted RBP9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 MRGPRGQ86SM5 289 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 C17orf78Q8N4C9 275 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RFLNBQ8N5W9 214 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ZNF610Q8N9Z0 462 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RAB2BQ8WUD1 216 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 RNF133Q8WVZ7 376 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 ASB5Q8WWX0 329 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 THRSPQ92748 146 aa9.02□□□□□ -0.97
PRPF38A-202ENST00000474048 NABP1Q96AH0 204 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms