RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 TMCC2O75069 709 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 ATP6V1G2O95670 118 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 PLAUP00749 431 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 ZNF35P13682 527 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 GSTT1P30711 240 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 CALCRP30988 508 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 APLNRP35414 380 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 ENTPD1P49961 510 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 APOFQ13790 326 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 TBC1D28Q2M2D7 210 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 ZNF672Q499Z4 452 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 KLHL12Q53G59 568 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 SLC18B1Q6NT16 456 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 ZNF511Q8NB15 262 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 CPEB3Q8NE35 698 aaKnown RBP16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 SLC30A7Q8NEW0 376 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 OR4F15Q8NGB8 312 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 OR2AJ1Q8NGZ0 328 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 LILRB1Q8NHL6 650 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 AKR7LQ8NHP1 331 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 IL4I1Q96RQ9 567 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 PLEKHF2Q9H8W4 249 aa16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 H2AFY2Q9P0M6 372 aaPredicted RBP16.46■□□□□ 0.23
CTDSP1-207ENST00000473420 SLC22A31A6NKX4 558 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 ATP6V1G2-DDX39BF2Z307 99 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 DOK2O60496 412 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 APEX1P27695 318 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 RPS7P62081 194 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 SNRPGP62308 76 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 RAB35Q15286 201 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 SLC25A30Q5SVS4 291 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 OTPQ5XKR4 325 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF774Q6NX45 483 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 LYPD4Q6UWN0 246 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 MEPCEQ7L2J0 689 aaKnown RBP16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 VASH1Q7L8A9 365 aaPredicted RBP16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 TIGD4Q8IY51 512 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 INTS14Q96SY0 518 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 TEAD3Q99594 435 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 HDHD2Q9H0R4 259 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 VCX3BQ9H321 246 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 WDR76Q9H967 626 aa16.45■□□□□ 0.22
CTDSP1-207ENST00000473420 FBN2P35556 2912 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 CCDC182A6NF36 153 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 H0YJX3 145 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 HS3ST1O14792 307 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 SYNGR3O43761 229 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 MPZL2O60487 215 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 STOMP27105 288 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 CDH11P55287 796 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 GGTLC2Q14390 218 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 CCDC92Q53HC0 331 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 TTC23Q5W5X9 447 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 SHFQ7M4L6 423 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 ERI1Q8IV48 349 aaKnown RBP16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 LINC00346Q8IVM7 164 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 NUP37Q8NFH4 326 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 NRG4Q8WWG1 115 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 AKAP1Q92667 903 aaKnown RBP eCLIP16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 ZMYND19Q96E35 227 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 POM121L2Q96KW2 1035 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 PLEK2Q9NYT0 353 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 GDF2Q9UK05 429 aaPredicted RBP16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 POU2F3Q9UKI9 436 aa16.44■□□□□ 0.22
CTDSP1-207ENST00000473420 OR6C6A6NF89 314 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF593O00488 134 aaPredicted RBP16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 RER1O15258 196 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 SPARCP09486 303 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 GDI2P50395 445 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 TMED1Q13445 227 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 ELFN2Q5R3F8 820 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 MEDAGQ5VYS4 303 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 CORO6Q6QEF8 472 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 BCDIN3DQ7Z5W3 292 aaKnown RBP16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 DHRSXQ8N5I4 330 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 ZNF611Q8N823 705 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 OR6N2Q8NGY6 317 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 RFKQ969G6 155 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 FBXW5Q969U6 566 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 COQ7Q99807 217 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 APOL4Q9BPW4 351 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 CDH20Q9HBT6 801 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 HAO2Q9NYQ3 351 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 SPEF1Q9Y4P9 236 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 ATP23Q9Y6H3 246 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 APCP25054 2843 aa16.43■□□□□ 0.22
CTDSP1-207ENST00000473420 LOC100509620A0A075B734 347 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 H0YAE9 185 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 ICMTO60725 284 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 PSKH1P11801 424 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 NR4A1P22736 598 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 PCSK6P29122 969 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 HTR5AP47898 357 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 KRTAP10-9P60411 292 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 ADARB1P78563 741 aaKnown RBP16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 GALK2Q01415 458 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 HGFACQ04756 655 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 ECH1Q13011 328 aa16.42■□□□□ 0.22
CTDSP1-207ENST00000473420 OCLNQ16625 522 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms