RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 RPS27AP62979 156 aaKnown RBP18.96■□□□□ 0.63
COL18A1-207ENST00000473212 UBA52P62987 128 aaKnown RBP18.96■□□□□ 0.63
COL18A1-207ENST00000473212 BIKQ13323 160 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 LRFN4Q6PJG9 635 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 WDFY1Q8IWB7 410 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 ASB17Q8WXJ9 295 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 ADIPOR1Q96A54 375 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 CKLFQ9UBR5 152 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 MED12Q93074 2177 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 ABCA7Q8IZY2 2146 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 A0A1W2PPC1 479 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 PRSS37A4D1T9 235 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 LMX1BO60663 402 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 ADAM8P78325 824 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 LRRC37A5PQ49AS3 106 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 VWA2Q5GFL6 755 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 C16orf47Q6ZP98 133 aaPredicted RBP18.96■□□□□ 0.63
COL18A1-207ENST00000473212 KLHDC7BQ96G42 594 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 MSRAQ9UJ68 235 aa18.96■□□□□ 0.63
COL18A1-207ENST00000473212 VPS13AQ96RL7 3174 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 C10orf142B7Z368 130 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 SULT1C2O00338 296 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 CCSO14618 274 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 EIF4E2O60573 245 aaKnown RBP18.95■□□□□ 0.62
COL18A1-207ENST00000473212 CYB5AP00167 134 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF735P0CB33 412 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 HLA-DOBP13765 273 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 DHRS2Q13268 280 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 MOGAT2Q3SYC2 334 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 BEX5Q5H9J7 111 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 ADAMTS18Q8TE60 1221 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 SLC25A44Q96H78 314 aaPredicted RBP18.95■□□□□ 0.62
COL18A1-207ENST00000473212 CMKLR1Q99788 373 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 RASL12Q9NYN1 266 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 FER1L5A0AVI2 2057 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 LOC101059948A0A1B0GTJ6 334 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 DDAH2O95865 285 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 AGTR1P30556 359 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 TOMM20Q15388 145 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 CLVS2Q5SYC1 327 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.95■□□□□ 0.62
COL18A1-207ENST00000473212 C9orf40Q8IXQ3 194 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 BPIFB2Q8N4F0 458 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 ESX1Q8N693 406 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 OR5M8Q8NGP6 311 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 LMX1AQ8TE12 382 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 C8orf44Q96CB5 159 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 LAT2Q9GZY6 243 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 PRMT8Q9NR22 394 aaPredicted RBP18.95■□□□□ 0.62
COL18A1-207ENST00000473212 MRTO4Q9UKD2 239 aaKnown RBP18.95■□□□□ 0.62
COL18A1-207ENST00000473212 HRH3Q9Y5N1 445 aa18.95■□□□□ 0.62
COL18A1-207ENST00000473212 A0A0D9SG52 128 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 C2orf72A6NCS6 295 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 TTLL8A6PVC2 850 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF736B4DX44 427 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 CD2P06729 351 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 CD34P28906 385 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 LUMP51884 338 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 ARHGDIBP52566 201 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 SPOCK1Q08629 439 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 PMPCAQ10713 525 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 EIF2B1Q14232 305 aaKnown RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 TAF13Q15543 124 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 ELP2Q6IA86 826 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 JAGN1Q8N5M9 183 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 OR4S1Q8NGB4 309 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF721Q8TF20 911 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 SEC22AQ96IW7 307 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 NOP16Q9Y3C1 178 aaKnown RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 LRP12Q9Y561 859 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 TRAV36DV7A0A075B6V5 113 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 CD8AP01732 235 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 STARP49675 285 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 RIDAP52758 137 aaKnown RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 RPL27P61353 136 aaKnown RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 NKPD1Q17RQ9 610 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 DEFB133Q30KQ1 61 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 JMJD6Q6NYC1 403 aaPredicted RBP18.94■□□□□ 0.62
COL18A1-207ENST00000473212 CATSPERDQ86XM0 798 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 ZNF75AQ96N20 296 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 SLC6A7Q99884 636 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 PDCD10Q9BUL8 212 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 ABHD6Q9BV23 337 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 GPR27Q9NS67 375 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 KLK13Q9UKR3 277 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 PLCL2Q9UPR0 1127 aa18.94■□□□□ 0.62
COL18A1-207ENST00000473212 FITM1A5D6W6 292 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 IGKV3-11P04433 115 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 IGFBP3P17936 291 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 DEFA5Q01523 94 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 SERTAD2Q14140 314 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 ATXN7L3Q14CW9 347 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 SHISA6Q6ZSJ9 500 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 NUP54Q7Z3B4 507 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 OR13C8Q8NGS7 320 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 SCPEP1Q9HB40 452 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 TAS2R3Q9NYW6 316 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 GPN3Q9UHW5 284 aaPredicted RBP18.93■□□□□ 0.62
COL18A1-207ENST00000473212 SPAG17Q6Q759 2223 aa18.93■□□□□ 0.62
COL18A1-207ENST00000473212 LOC100509620A0A075B734 347 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms