RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 COG8Q96MW5 612 aa16.65■□□□□ 0.26
COMMD1-208ENST00000472729 CDADC1Q9BWV3 514 aa16.65■□□□□ 0.26
COMMD1-208ENST00000472729 NUAK2Q9H093 628 aa16.65■□□□□ 0.26
COMMD1-208ENST00000472729 OR52D1Q9H346 318 aa16.65■□□□□ 0.26
COMMD1-208ENST00000472729 VSX1Q9NZR4 365 aaPredicted RBP16.65■□□□□ 0.26
COMMD1-208ENST00000472729 NAV3Q8IVL0 2385 aa16.65■□□□□ 0.26
COMMD1-208ENST00000472729 TLN2Q9Y4G6 2542 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 LRP5LA4QPB2 252 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 IGHV3-13P01766 116 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 COX5BP10606 129 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 LSM6P62312 80 aaKnown RBP16.64■□□□□ 0.25
COMMD1-208ENST00000472729 RIN1Q13671 783 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 LEG1Q6P5S2 330 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 ZNF101Q8IZC7 436 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 SLC25A40Q8TBP6 338 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 MSI2Q96DH6 328 aaKnown RBP16.64■□□□□ 0.25
COMMD1-208ENST00000472729 TRIM15Q9C019 465 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 OR2J1Q9GZK6 312 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 EGLN1Q9GZT9 426 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 SRA1Q9HD15 236 aaKnown RBP16.64■□□□□ 0.25
COMMD1-208ENST00000472729 TMEM160Q9NX00 188 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 ASH2LQ9UBL3 628 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 GRIP1Q9Y3R0 1128 aa16.64■□□□□ 0.25
COMMD1-208ENST00000472729 FN1P02751 2386 aaKnown RBP16.64■□□□□ 0.25
COMMD1-208ENST00000472729 IDH3BO43837 385 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TIMM8AO60220 97 aaPredicted RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TXNDC12O95881 172 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 HLA-DQA2P01906 255 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TUBG1P23258 451 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 WNT5AP41221 380 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 MAGEB1P43366 347 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TSPAN31Q12999 210 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TRIM25Q14258 630 aaKnown RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TSTQ16762 297 aaKnown RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 ELFN2Q5R3F8 820 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 MBNL2Q5VZF2 373 aaKnown RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 RPL13AP3Q6NVV1 102 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 PRIMA1Q86XR5 153 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 NPEPL1Q8NDH3 523 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 KLF14Q8TD94 323 aaPredicted RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 SAMD8Q96LT4 415 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 GPA33Q99795 319 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 FUZQ9BT04 418 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 SAP30LQ9HAJ7 183 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 TUBG2Q9NRH3 451 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 NKIRAS2Q9NYR9 191 aa16.63■□□□□ 0.25
COMMD1-208ENST00000472729 CGGBP1Q9UFW8 167 aaPredicted RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 PRPF19Q9UMS4 504 aaKnown RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 NSD1Q96L73 2696 aaPredicted RBP16.63■□□□□ 0.25
COMMD1-208ENST00000472729 ABCA2Q9BZC7 2435 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 H3BSA7 217 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 SPRY3O43610 288 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 CDC14BO60729 498 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 CCNB2O95067 398 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 IGFBP1P08833 259 aaPredicted RBP16.62■□□□□ 0.25
COMMD1-208ENST00000472729 TACSTD2P09758 323 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 COL8A2P25067 703 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 CDKN2AP42771 156 aaKnown RBP16.62■□□□□ 0.25
COMMD1-208ENST00000472729 CCNIQ14094 377 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 HFEQ30201 348 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 SLC36A3Q495N2 470 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 FAM209AQ5JX71 171 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 C1orf94Q6P1W5 598 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 LINC01356Q8N9X3 169 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 GJC3Q8NFK1 279 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 OR2AJ1Q8NGZ0 328 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 OR4K13Q8NH42 304 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 MARS2Q96GW9 593 aaKnown RBP16.62■□□□□ 0.25
COMMD1-208ENST00000472729 TIMD4Q96H15 378 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 NMNAT3Q96T66 252 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 MAGIXQ9H6Y5 334 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 REEP1Q9H902 201 aa16.62■□□□□ 0.25
COMMD1-208ENST00000472729 IGHV1-69-2A0A0G2JMI3 117 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 ARPC3O15145 178 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 MPZL1O95297 269 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 SCG5P05408 212 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 FAM157CP0CG43 387 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 PCMT1P22061 227 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 CLEC12AQ5QGZ9 265 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 RINLQ6ZS11 566 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 PTCHD4Q6ZW05 846 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 VASH1Q7L8A9 365 aaPredicted RBP16.61■□□□□ 0.25
COMMD1-208ENST00000472729 OR5L1Q8NGL2 311 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 OR1F12Q8NHA8 337 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 IPCEF1Q8WWN9 437 aaPredicted RBP16.61■□□□□ 0.25
COMMD1-208ENST00000472729 CCDC124Q96CT7 223 aaKnown RBP16.61■□□□□ 0.25
COMMD1-208ENST00000472729 DIRC2Q96SL1 478 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 NARFLQ9H6Q4 476 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 RPRD1BQ9NQG5 326 aaKnown RBP16.61■□□□□ 0.25
COMMD1-208ENST00000472729 ZNF275Q9NSD4 429 aaPredicted RBP16.61■□□□□ 0.25
COMMD1-208ENST00000472729 TBCCD1Q9NVR7 557 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 ZDHHC8Q9ULC8 765 aa16.61■□□□□ 0.25
COMMD1-208ENST00000472729 OR6C6A6NF89 314 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 LILRA1O75019 489 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 NGFP01138 241 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 HIST1H1CP16403 213 aaKnown RBP16.6■□□□□ 0.25
COMMD1-208ENST00000472729 ATP6V1B2P21281 511 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 TNFSF4P23510 183 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 MPV17P39210 176 aa16.6■□□□□ 0.25
COMMD1-208ENST00000472729 GSSP48637 474 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms