RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 IGHV2OR16-5A0A0B4J2B6 119 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 DLGAP1O14490 977 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 HS3ST1O14792 307 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 GPANK1O95872 356 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 STOMP27105 288 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 PCSK6P29122 969 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 SNRPGP62308 76 aaKnown RBP17.32■□□□□ 0.36
SF1-213ENST00000472725 ECH1Q13011 328 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 RAB35Q15286 201 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 MEP1BQ16820 701 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 KLHL12Q53G59 568 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 MEDAGQ5VYS4 303 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 TTC23Q5W5X9 447 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 SLC18B1Q6NT16 456 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 UNQ6126/PRO20091Q6UXV3 157 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 C20orf204Q6ZNR8 217 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 MEPCEQ7L2J0 689 aaKnown RBP17.32■□□□□ 0.36
SF1-213ENST00000472725 SHFQ7M4L6 423 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 C1orf174Q8IYL3 243 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 ZNF511Q8NB15 262 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 RFKQ969G6 155 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 MS4A3Q96HJ5 214 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 INTS14Q96SY0 518 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 TEAD3Q99594 435 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 HAO2Q9NYQ3 351 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 PLEK2Q9NYT0 353 aa17.32■□□□□ 0.36
SF1-213ENST00000472725 RRP15Q9Y3B9 282 aaKnown RBP17.32■□□□□ 0.36
SF1-213ENST00000472725 RAI1Q7Z5J4 1906 aaPredicted RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 A0A1W2PPR1 153 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 VSTM5A8MXK1 200 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 DOK2O60496 412 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 PLAUP00749 431 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 GDI2P50395 445 aaKnown RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 RPS7P62081 194 aaKnown RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 APOFQ13790 326 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 ELFN2Q5R3F8 820 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 RHOUQ7L0Q8 258 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 VASH1Q7L8A9 365 aaPredicted RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 MYPOPQ86VE0 399 aaPredicted RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 TIGD4Q8IY51 512 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 ZNF611Q8N823 705 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 CPEB3Q8NE35 698 aaKnown RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 KBTBD8Q8NFY9 601 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 AKR7LQ8NHP1 331 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 AKAP1Q92667 903 aaKnown RBP eCLIP17.31■□□□□ 0.36
SF1-213ENST00000472725 FBXW5Q969U6 566 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 POM121L2Q96KW2 1035 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 IL4I1Q96RQ9 567 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 DCLRE1CQ96SD1 692 aaKnown RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 COQ7Q99807 217 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 APOL4Q9BPW4 351 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 CDH20Q9HBT6 801 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 GDF2Q9UK05 429 aaPredicted RBP17.31■□□□□ 0.36
SF1-213ENST00000472725 POU2F3Q9UKI9 436 aa17.31■□□□□ 0.36
SF1-213ENST00000472725 CRYBG3Q68DQ2 2970 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 OR6C6A6NF89 314 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 TVP23AA6NH52 213 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 SNTNA6NMZ2 147 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ATP6V1G2-DDX39BF2Z307 99 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ZNF593O00488 134 aaPredicted RBP17.3■□□□□ 0.36
SF1-213ENST00000472725 SYNGR3O43761 229 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ICMTO60725 284 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ATP6V1G2O95670 118 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 APEX1P27695 318 aaKnown RBP17.3■□□□□ 0.36
SF1-213ENST00000472725 CALCRP30988 508 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 CDH11P55287 796 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 GALK2Q01415 458 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 IL18R1Q13478 541 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 GGTLC2Q14390 218 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 CCDC92Q53HC0 331 aaPredicted RBP17.3■□□□□ 0.36
SF1-213ENST00000472725 ZNF774Q6NX45 483 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ZNF544Q6NX49 715 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ARL9Q6T311 187 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 DHRSXQ8N5I4 330 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 ZNF454Q8N9F8 522 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 BBS1Q8NFJ9 593 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 OR1F12Q8NHA8 337 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 LILRB1Q8NHL6 650 aaPredicted RBP17.3■□□□□ 0.36
SF1-213ENST00000472725 ZNF442Q9H7R0 627 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 WDR76Q9H967 626 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 FAIMQ9NVQ4 179 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 CISD1Q9NZ45 108 aaKnown RBP17.3■□□□□ 0.36
SF1-213ENST00000472725 WARS2Q9UGM6 360 aaKnown RBP17.3■□□□□ 0.36
SF1-213ENST00000472725 CACNA1DQ01668 2161 aa17.3■□□□□ 0.36
SF1-213ENST00000472725 H0YAE9 185 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 RER1O15258 196 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 NR4A1P22736 598 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 RPS23P62266 143 aaKnown RBP17.29■□□□□ 0.36
SF1-213ENST00000472725 SPOCK1Q08629 439 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 POU4F2Q12837 409 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 OCLNQ16625 522 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.29■□□□□ 0.36
SF1-213ENST00000472725 ERI1Q8IV48 349 aaKnown RBP17.29■□□□□ 0.36
SF1-213ENST00000472725 ZMYND19Q96E35 227 aaPredicted RBP17.29■□□□□ 0.36
SF1-213ENST00000472725 Q96MT0 163 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 MNTQ99583 582 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 DHRS9Q9BPW9 319 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 EIF3KQ9UBQ5 218 aaKnown RBP17.29■□□□□ 0.36
SF1-213ENST00000472725 ATP23Q9Y6H3 246 aa17.29■□□□□ 0.36
SF1-213ENST00000472725 UNC79Q9P2D8 2635 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms