RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 WDR76Q9H967 626 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 SMURF2Q9HAU4 748 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 DECR2Q9NUI1 292 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 GID8Q9NWU2 228 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 SLCO1C1Q9NYB5 712 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 NKIRAS2Q9NYR9 191 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 UBAP1Q9NZ09 502 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 NDUFAF4Q9P032 175 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 FBXO9Q9UK97 447 aaPredicted RBP6.82□□□□□ -1.32
USP48-207ENST00000471752 FBXL3Q9UKT7 428 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 GRIP1Q9Y3R0 1128 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 IER3IP1Q9Y5U9 82 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 V9GYQ6 96 aa6.82□□□□□ -1.32
USP48-207ENST00000471752 IGHV3OR16-10A0A075B7F0 116 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 PRSS37A4D1T9 235 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 NPIPB13A6NJU9 1138 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 BBIP1A8MTZ0 92 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 CENPBD1B2RD01 187 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 NPIPB4C9JG80 1138 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 SLC16A7O60669 478 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 TFP02787 698 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 IFNW1P05000 195 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 CD14P08571 375 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 SBK2P0C263 348 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 PSKH1P11801 424 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 MSR1P21757 451 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 DRD4P21917 467 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 RPL4P36578 427 aaKnown RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 OMPP47874 163 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 LIMS1P48059 325 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 PSME3P61289 254 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 CDK5R2Q13319 367 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ZMYND11Q15326 602 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ZNF718Q3SXZ3 478 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ZBED5Q49AG3 693 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 IFI44LQ53G44 452 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 KLF17Q5JT82 389 aaPredicted RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 OR2T2Q6IF00 324 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ACSM5Q6NUN0 579 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 LIAT1Q6ZQX7 453 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 TMPRSS11FQ6ZWK6 438 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 FKBP9P1Q75LS8 142 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ZER1Q7Z7L7 766 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 PEG10Q86TG7 708 aaKnown RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 ZDHHC22Q8N966 263 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 PCYOX1LQ8NBM8 494 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 OR51F2Q8NH61 342 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 RP9Q8TA86 221 aaKnown RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 ITLN1Q8WWA0 313 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ACOT11Q8WXI4 607 aaPredicted RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 SIGLEC11Q96RL6 698 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ELAC2Q9BQ52 826 aaKnown RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 POLR2J2Q9GZM3 115 aaKnown RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 NUAK2Q9H093 628 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 POLR2J3Q9H1A7 115 aaKnown RBP6.81□□□□□ -1.32
USP48-207ENST00000471752 SYT4Q9H2B2 425 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 SAP30LQ9HAJ7 183 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 SIGLEC7Q9Y286 467 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ENPP4Q9Y6X5 453 aa6.81□□□□□ -1.32
USP48-207ENST00000471752 ISPDA4D126 451 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 OR6C6A6NF89 314 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 SOCS2O14508 198 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 GSTA4O15217 222 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 ICMTO60725 284 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 PNPP00491 289 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 FSHBP01225 129 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 PTHP01270 115 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 IFNA14P01570 189 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 IGHV2-70P01814 119 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 EGR1P18146 543 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 EPHA1P21709 976 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 GCH1P30793 250 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 MDH1P40925 334 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 RPS27P42677 84 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 NUDT2P50583 147 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 SELENOVP59797 346 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 PRKDCP78527 4128 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 PPP1R8Q12972 351 aaKnown RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 HFEQ30201 348 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 PCGF3Q3KNV8 242 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 LIPNQ5VXI9 398 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 GLYATQ6IB77 296 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 LYPD4Q6UWN0 246 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 DPPA2Q7Z7J5 298 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 C19orf18Q8NEA5 215 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 DEFB108BQ8NET1 73 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 OR2Z1Q8NG97 314 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 OR10AD1Q8NGE0 317 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 ZNF420Q8TAQ5 688 aaPredicted RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 SNX33Q8WV41 574 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 DVL3Q92997 716 aaPredicted RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 C1orf147Q96MC9 270 aaPredicted RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 ZNF48Q96MX3 618 aaPredicted RBP6.8□□□□□ -1.32
USP48-207ENST00000471752 PLA2G12AQ9BZM1 189 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 LRMDAQ9H2I8 198 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 KCNN2Q9H2S1 579 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 C1orf198Q9H425 327 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 FN3KQ9H479 309 aa6.8□□□□□ -1.32
USP48-207ENST00000471752 CCDC134Q9H6E4 229 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms