RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PARM1Q6UWI2 310 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM207Q6UWW9 146 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GHSRQ92847 366 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ISG20Q96AZ6 181 aaKnown RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FBXO17Q96EF6 278 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLAMF8Q9P0V8 285 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HSPE1-MOB4S4R3N1 261 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PNPP00491 289 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 YPEL5P62699 121 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SPACA5Q96QH8 159 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR51I2Q9H344 312 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NAP1L6A6NFF2 107 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MKRN2OSH3BPM6 223 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TNFSF11O14788 317 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 LAP3P28838 519 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 THEM4Q5T1C6 240 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DPPA2Q7Z7J5 298 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RPS19BP1Q86WX3 136 aaKnown RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NIPSNAP3BQ9BS92 247 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FZR1Q9UM11 496 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TIMM9Q9Y5J7 89 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 POLR2AP24928 1970 aaKnown RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CLEC12BQ2HXU8 276 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OTPQ5XKR4 325 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CPZQ66K79 652 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 MOB3BQ86TA1 216 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 GJC3Q8NFK1 279 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC37A2Q8TED4 501 aa12.16□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 G3V2L1 256 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 M0QZQ0 153 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ALOX12BO75342 701 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CSF3P09919 207 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZDHHC11BP0C7U3 371 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ERVFC1-1P60608 527 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 VAMP3Q15836 100 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FNDC8Q8TC99 324 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PSD2Q9BQI7 771 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 FAM103A1Q9BTL3 118 aaKnown RBP12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ABCC6O95255 1503 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SPATA31D1Q6ZQQ2 1576 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 A0A1W2PNR3 127 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM221A6NGB7 291 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SELENOFO60613 162 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 EIF1BO60739 113 aaKnown RBP12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PLAUP00749 431 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ADRA1AP35348 466 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SLC19A1P41440 591 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SMN1Q16637 294 aaKnown RBP12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 BCDIN3DQ7Z5W3 292 aaKnown RBP12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 STACQ99469 402 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF487B1APH4 448 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 IL10RAQ13651 578 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF740Q8NDX6 193 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM255BQ8WV15 326 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C1GALT1Q9NS00 363 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C10orf71Q711Q0 1435 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TAF1P21675 1872 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CDHR4A6H8M9 788 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SIAH2O43255 324 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DNAJB5O75953 348 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DEFA6Q01524 100 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CDC20BQ86Y33 519 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR4Q3Q8NH05 313 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PLA2G12AQ9BZM1 189 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TLCD2A6NGC4 264 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PCBP3P57721 371 aaKnown RBP12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ANGPTL6Q8NI99 470 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RDH5Q92781 318 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RANGRFQ9HD47 186 aaPredicted RBP12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CTSFQ9UBX1 484 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 UBE2L6O14933 153 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PIAS2O75928 621 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PDGFAP04085 211 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 HSD17B1P14061 328 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TPMTP51580 245 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 POFUT1Q9H488 388 aa12.15□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PPP1R2P9O14990 202 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CRYAAP02489 173 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SOHLH1Q5JUK2 328 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FBXO27Q8NI29 283 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GAR1Q9NY12 217 aaKnown RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TMEM218A2RU14 115 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FAM90A27PA6NNH2 459 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SHC1P29353 583 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 AMIGO3Q86WK7 504 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PLEKHF2Q9H8W4 249 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 COA3Q9Y2R0 106 aaPredicted RBP12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IGKV3-7A0A075B6H7 116 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SMLR1H3BR10 107 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 PFN4Q8NHR9 129 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 A0A1B0GX78 115 aa12.14□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 EIF3FO00303 357 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms