RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 OR8G3PP0DMU2 310 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 CELP19835 753 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 GABRA5P31644 462 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 KIR2DL2P43627 348 aaPredicted RBP13.31□□□□□ -0.28
COL4A5-203ENST00000470339 AQP6Q13520 282 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 ENDOGQ14249 297 aaKnown RBP13.31□□□□□ -0.28
COL4A5-203ENST00000470339 ST3GAL2Q16842 350 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 LIPNQ5VXI9 398 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 DMKNQ6E0U4 476 aaPredicted RBP13.31□□□□□ -0.28
COL4A5-203ENST00000470339 SEM1Q6ZVN7 128 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 KRT77Q7Z794 578 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 SLC22A24Q8N4F4 322 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 YIPF7Q8N8F6 280 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 MAP6Q96JE9 813 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 AMELYQ99218 206 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 COQ7Q99807 217 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 ELOVL3Q9HB03 270 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 PLSCR4Q9NRQ2 329 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 SLCO1C1Q9NYB5 712 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 ST6GALNAC2Q9UJ37 374 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 GDF2Q9UK05 429 aaPredicted RBP13.31□□□□□ -0.28
COL4A5-203ENST00000470339 IKZF2Q9UKS7 526 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 SF3B6Q9Y3B4 125 aaKnown RBP13.31□□□□□ -0.28
COL4A5-203ENST00000470339 FAM215AQ9Y5M1 114 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 PKD1L2Q7Z442 2459 aa13.31□□□□□ -0.28
COL4A5-203ENST00000470339 TRIM64BA6NI03 449 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 E9PI62 339 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 MAGEB4O15481 346 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 AIREO43918 545 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 FARS2O95363 451 aaKnown RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 IL2RAP01589 272 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 GADD45AP24522 165 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 EDNRAP25101 427 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 MPGP29372 298 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 CEACAM8P31997 349 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 OPRL1P41146 370 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 RIDAP52758 137 aaKnown RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 PCBD1P61457 104 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 CTF1Q16619 201 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 TFAP2EQ6VUC0 442 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 DOLPP1Q86YN1 238 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 LINC00346Q8IVM7 164 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 ALDH16A1Q8IZ83 802 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 UBE2J2Q8N2K1 259 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 MS4A15Q8N5U1 240 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 RNF166Q96A37 237 aaPredicted RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 SLAMF6Q96DU3 332 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 TTTY10Q9BZA0 68 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 NAA50Q9GZZ1 169 aaKnown RBP13.3□□□□□ -0.28
COL4A5-203ENST00000470339 KCNN2Q9H2S1 579 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 NIPAL2Q9H841 368 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 ACOXLQ9NUZ1 547 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 ASH2LQ9UBL3 628 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 STUB1Q9UNE7 303 aa13.3□□□□□ -0.28
COL4A5-203ENST00000470339 BSNQ9UPA5 3926 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 ARPC4-TTLL3A0A0A6YYG9 625 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 TTLL8A6PVC2 850 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 ZNF878C9JN71 531 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 H3BMQ9 156 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 SLC22A1O15245 554 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 GPRIN2O60269 458 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 SLC19A2O60779 497 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 IGHV3-9P01782 118 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 H2BFMP0C1H6 154 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 TMIGD3P0DMS9 266 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CTSSP25774 331 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CRYBB2P43320 205 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CCR9P51686 369 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 GTF2A1P52655 376 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 PER3P56645 1201 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 ARF1P84077 181 aaKnown RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 FAPQ12884 760 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CDK5R1Q15078 307 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 PRR30Q53SZ7 412 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 OTPQ5XKR4 325 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CD200R1LQ6Q8B3 271 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CORO6Q6QEF8 472 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 LRRN1Q6UXK5 716 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 ZNF813Q6ZN06 617 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 CFAP77Q6ZQR2 320 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 DPPA2Q7Z7J5 298 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 GCNT2Q8N0V5 402 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 C12orf43Q96C57 262 aaKnown RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 SMIM19Q96E16 107 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 BOD1Q96IK1 185 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 C12orf49Q9H741 205 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 DDX28Q9NUL7 540 aaKnown RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 PRSS50Q9UI38 385 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 LRP12Q9Y561 859 aa13.29□□□□□ -0.28
COL4A5-203ENST00000470339 SIRT4Q9Y6E7 314 aaPredicted RBP13.29□□□□□ -0.28
COL4A5-203ENST00000470339 TRBV2A0A0J9YWF9 115 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 TRDV1A0A1B0GX56 115 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 PSMD9O00233 223 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 TNFSF13O75888 250 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 HLA-DPB1P04440 258 aa13.28□□□□□ -0.28
COL4A5-203ENST00000470339 FGF9P31371 208 aaPredicted RBP13.28□□□□□ -0.28
COL4A5-203ENST00000470339 GRB2P62993 217 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms