RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 SRA1Q9HD15 236 aaKnown RBP11.94□□□□□ -0.5
LINC00173-201ENST00000470091 LAMP3Q9UQV4 416 aa11.94□□□□□ -0.5
LINC00173-201ENST00000470091 EXOSC1Q9Y3B2 195 aaKnown RBP11.94□□□□□ -0.5
LINC00173-201ENST00000470091 FBN1P35555 2871 aaKnown RBP11.94□□□□□ -0.5
LINC00173-201ENST00000470091 LOC102725191A0A1B0GVB3 256 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 J3QRE1 110 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 HS3ST1O14792 307 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 MYL12BO14950 172 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 SEC14L2O76054 403 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 TFP02787 698 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 SBK2P0C263 348 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 CTLA4P16410 223 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 AGTR1P30556 359 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 CLDN17P56750 224 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 FMODQ06828 376 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 POU4F2Q12837 409 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 CARD17Q5XLA6 110 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF367Q7RTV3 350 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 NUFIP2Q7Z417 695 aaKnown RBP11.93□□□□□ -0.5
LINC00173-201ENST00000470091 OR6V1Q8N148 313 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 OR13F1Q8NGS4 319 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 ABHD3Q8WU67 409 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 SMAP2Q8WU79 429 aaPredicted RBP11.93□□□□□ -0.5
LINC00173-201ENST00000470091 FCGR1BQ92637 280 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 CPNE4Q96A23 557 aaPredicted RBP11.93□□□□□ -0.5
LINC00173-201ENST00000470091 S100PBPQ96BU1 408 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 FOXN4Q96NZ1 517 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 OR5M11Q96RB7 305 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 KCNK17Q96T54 332 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 MDFIQ99750 246 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 MND1Q9BWT6 205 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 NUAK2Q9H093 628 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 TIGARQ9NQ88 270 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 GLRX2Q9NS18 164 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 HAO2Q9NYQ3 351 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 LSM2Q9Y333 95 aaKnown RBP11.93□□□□□ -0.5
LINC00173-201ENST00000470091 FKBP7Q9Y680 259 aa11.93□□□□□ -0.5
LINC00173-201ENST00000470091 IGLV1-36A0A0B4J1U3 117 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 SMIM31A0A1B0GVY4 71 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 SLC35F4A4IF30 521 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 TVP23AA6NH52 213 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 C12orf71A8MTZ7 269 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 SLC16A7O60669 478 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 VAMP5O95183 116 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 GPANK1O95872 356 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 IGHG1P01857 330 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CENPAP49450 140 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CLRN1P58418 232 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 TNK1Q13470 666 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CAMK2DQ13557 499 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 SLC17A1Q14916 467 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 RNLSQ5VYX0 342 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CREB3L2Q70SY1 520 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 HDDC2Q7Z4H3 204 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 LHFPL3Q86UP9 236 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 TUSC5Q8IXB3 177 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 SLC35F2Q8IXU6 374 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 RFLNBQ8N5W9 214 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF611Q8N823 705 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 POMGNT2Q8NAT1 580 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF511Q8NB15 262 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 MAPK1IP1LQ8NDC0 245 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 STEAP2Q8NFT2 490 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 NEUROG1Q92886 237 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF775Q96BV0 537 aaPredicted RBP11.92□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF385AQ96PM9 386 aaKnown RBP11.92□□□□□ -0.5
LINC00173-201ENST00000470091 JAM3Q9BX67 310 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 RBM38Q9H0Z9 239 aaKnown RBP11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CXorf56Q9H5V9 222 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CHCHD3Q9NX63 227 aaKnown RBP11.92□□□□□ -0.5
LINC00173-201ENST00000470091 B9D1Q9UPM9 204 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 MOKQ9UQ07 419 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 ERGIC3Q9Y282 383 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 FREM1Q5H8C1 2179 aa11.92□□□□□ -0.5
LINC00173-201ENST00000470091 CADP27708 2225 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 RTTNQ86VV8 2226 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ALPK2Q86TB3 2170 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 IGKV1D-43A0A0B4J1Z2 117 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ZNF716A6NP11 495 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 CYTIPO60759 359 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 PGA4P0DJD7 388 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 PGA3P0DJD8 388 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 PSMB1P20618 241 aaKnown RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 IL32P24001 234 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 MED22Q15528 200 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ETFDHQ16134 617 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 TIGD6Q17RP2 521 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 SYT6Q5T7P8 510 aaPredicted RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 OR2G6Q5TZ20 316 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 OTPQ5XKR4 325 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 FCRLAQ7L513 359 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ZBTB46Q86UZ6 589 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 CLVS1Q8IUQ0 354 aaPredicted RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ERI1Q8IV48 349 aaKnown RBP11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ACBD7Q8N6N7 88 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 NANOGP1Q8N7R0 232 aa11.91□□□□□ -0.5
LINC00173-201ENST00000470091 ZIC4Q8N9L1 334 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms