RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 ALG10Q5BKT4 473 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 ALG10BQ5I7T1 473 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 DEFB121Q5J5C9 76 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 DCST2Q5T1A1 773 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 TMEM225Q6GV28 225 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 FAM71E1Q6IPT2 247 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 CDC73Q6P1J9 531 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 DPPA2Q7Z7J5 298 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 MDP1Q86V88 176 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 C1orf174Q8IYL3 243 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 GPR137CQ8N3F9 429 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 ZNF614Q8N883 585 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 ZIC4Q8N9L1 334 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 OR4F6Q8NGB9 312 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 OR10S1Q8NGN2 331 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 VANGL1Q8TAA9 524 aaPredicted RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 MUC7Q8TAX7 377 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 ZNF519Q8TB69 540 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 TMED6Q8WW62 240 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 C11orf40Q8WZ69 217 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 CCL17Q92583 94 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 CHMP6Q96FZ7 201 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 C3orf30Q96M34 536 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 MAGEB18Q96M61 343 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 ALKBH3Q96Q83 286 aaPredicted RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 BAG1Q99933 345 aaPredicted RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 KLHDC3Q9BQ90 382 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 THUMPD3Q9BV44 507 aaKnown RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 BCL2L14Q9BZR8 327 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 SLC19A3Q9BZV2 496 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 TMEM165Q9HC07 324 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 EXOSC3Q9NQT5 275 aaKnown RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 MMP26Q9NRE1 261 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 FARSBQ9NSD9 589 aaKnown RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 TAAR3PQ9P1P4 343 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 CPSF2Q9P2I0 782 aaKnown RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 FAF1Q9UNN5 650 aaPredicted RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 RASD1Q9Y272 281 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 CAB39Q9Y376 341 aaPredicted RBP3.87□□□□□ -1.79
VPS8-219ENST00000469479 NPTNQ9Y639 398 aa3.87□□□□□ -1.79
VPS8-219ENST00000469479 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 IGHV2-70DA0A0C4DH43 119 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 DUXAA6NLW8 204 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 F5H0A9 414 aaPredicted RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 TRAPPC2LH3BP13 241 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 H3BQF6 201 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 H3BSA7 217 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 K7EIL1 84 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 PGRMC1O00264 195 aaKnown RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 P2RY10O00398 339 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 MANBAO00462 879 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 NR5A2O00482 541 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 TBX19O60806 448 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 RSL1D1O76021 490 aaKnown RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 UBL3O95164 117 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 KLHL2O95198 593 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 IGHV3-13P01766 116 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 IGHV2-70P01814 119 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 SERPINA5P05154 406 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 GUSBP08236 651 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CD79AP11912 226 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 ZNF14P17017 642 aaPredicted RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 HMOX2P30519 316 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 GABRA5P31644 462 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CD80P33681 288 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 POLR2HP52434 150 aaKnown RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 PMS2P3Q13401 168 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 ZNF141Q15928 474 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 ENTPD8Q5MY95 495 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.86□□□□□ -1.79
VPS8-219ENST00000469479 CASC10Q5T4H9 136 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CCNJQ5T5M9 372 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 LCE3AQ5TA76 89 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 C6orf89Q6UWU4 347 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CCBE1Q6UXH8 406 aaPredicted RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 ZER1Q7Z7L7 766 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 GPAT4Q86UL3 456 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 LRRC8AQ8IWT6 810 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CENPLQ8N0S6 344 aaPredicted RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 PTGR2Q8N8N7 351 aaPredicted RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 FBXO36Q8NEA4 188 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 FAM71CQ8NEG0 241 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 OR1J2Q8NGS2 313 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CDC26Q8NHZ8 85 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 ZNF563Q8TA94 476 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 PYROXD1Q8WU10 500 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 RAB40AQ8WXH6 277 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 MOAP1Q96BY2 351 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 MTERF3Q96E29 417 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 NEURL3Q96EH8 262 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 GIMAP5Q96F15 307 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 ZNF385AQ96PM9 386 aaKnown RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 TAPBPLQ9BX59 468 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 ACPTQ9BZG2 426 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 LRMDAQ9H2I8 198 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 PALMDQ9NP74 551 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 PNRC2Q9NPJ4 139 aaKnown RBP3.86□□□□□ -1.79
VPS8-219ENST00000469479 B3GAT2Q9NPZ5 323 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 CTPS2Q9NRF8 586 aa3.86□□□□□ -1.79
VPS8-219ENST00000469479 POLE3Q9NRF9 147 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms