RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 OR2I1PQ8NGU4 316 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 IL1F10Q8WWZ1 152 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 DCUN1D4Q92564 292 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 TAAR8Q969N4 342 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 SLC25A21Q9BQT8 299 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 ABHD6Q9BV23 337 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 TSPAN10Q9H1Z9 355 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 ZMAT3Q9HA38 289 aaKnown RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 TAS2R4Q9NYW5 299 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 CES1P1Q9UKY3 287 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 R4GMQ9 66 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 WDR81Q562E7 1941 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 M0R135 149 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 FFAR1O14842 300 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 DHHO43323 396 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 PTPN6P29350 595 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 CLDN6P56747 220 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 PMPCAQ10713 525 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 ASAH1Q13510 395 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 CLVS2Q5SYC1 327 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 CBLN3Q6UW01 205 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 FAM71CQ8NEG0 241 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 OR13C5Q8NGS8 318 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 GPR119Q8TDV5 335 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF799Q96GE5 643 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 RANGRFQ9HD47 186 aaPredicted RBP12.48□□□□□ -0.41
BRAT1-203ENST00000467558 SLC52A3Q9NQ40 469 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
BRAT1-203ENST00000467558 IGKV1-8A0A0C4DH67 115 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 TMEM127O75204 238 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 MT-CO3P00414 261 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 FUT7Q11130 342 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 FXNQ16595 210 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 CLPPQ16740 277 aaPredicted RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 NUBPLQ8TB37 319 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 ATF6BQ99941 703 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 C12orf49Q9H741 205 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 TRPM7Q96QT4 1865 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 HRO43593 1189 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF806P0C7X5 589 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 LIMS3P0CW19 117 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 LIMS4P0CW20 117 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 CLDN15P56746 228 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 DNAAF1Q8NEP3 725 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 OR52H1Q8NGJ2 320 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 ING1Q9UK53 422 aaPredicted RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 CDC42EP2O14613 210 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 RRP8O43159 456 aaKnown RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 TSPAN9O75954 239 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 PPIAP62937 165 aaKnown RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 MYBPHQ13203 477 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 DHRS13Q6UX07 377 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 SYT9Q86SS6 491 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 COLQQ9Y215 455 aaPredicted RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 SLC22A13Q9Y226 551 aa12.47□□□□□ -0.41
BRAT1-203ENST00000467558 LSM5Q9Y4Y9 91 aaKnown RBP12.47□□□□□ -0.41
BRAT1-203ENST00000467558 LINC01387J3KSC0 135 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 FUCA1P04066 466 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 UQCRC1P31930 480 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 CAV2P51636 162 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 IKZF1Q13422 519 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 ZMYND11Q15326 602 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 MEX3BQ6ZN04 569 aaKnown RBP12.46□□□□□ -0.41
BRAT1-203ENST00000467558 PRSS45Q7RTY3 260 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 NAXDQ8IW45 347 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 GTPBP8Q8N3Z3 284 aaPredicted RBP12.46□□□□□ -0.41
BRAT1-203ENST00000467558 OTOSQ8NHW6 89 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 DEFB127Q9H1M4 99 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 NELFAQ9H3P2 528 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 METTL17Q9H7H0 456 aaPredicted RBP12.46□□□□□ -0.41
BRAT1-203ENST00000467558 SLCO1C1Q9NYB5 712 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 A0A0A6YYH2 397 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 ANKRD61A6NGH8 418 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 A6NJ64 397 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 ZFP36L2P47974 494 aaKnown RBP12.46□□□□□ -0.41
BRAT1-203ENST00000467558 AADACL4Q5VUY2 407 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 THSD4Q6ZMP0 1018 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 SARAFQ96BY9 339 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 JAM3Q9BX67 310 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 ZNF768Q9H5H4 540 aaKnown RBP12.46□□□□□ -0.41
BRAT1-203ENST00000467558 SCPEP1Q9HB40 452 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 ACKR4Q9NPB9 350 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 PCYT1BQ9Y5K3 369 aaPredicted RBP12.46□□□□□ -0.41
BRAT1-203ENST00000467558 TRAV1-2A0A0B4J238 106 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 IL2RGP31785 369 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 OR4D11Q8NGI4 311 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 OR8B4Q96RC9 309 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 ZCCHC4Q9H5U6 513 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 GPR84Q9NQS5 396 aa12.46□□□□□ -0.41
BRAT1-203ENST00000467558 CLN3Q13286 438 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 LCN10Q6JVE6 187 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 STAC2Q6ZMT1 411 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 SLC22A18ASQ8N1D0 253 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 LSMEM1Q8N8F7 131 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 DTWD2Q8NBA8 298 aa12.46□□□□□ -0.42
BRAT1-203ENST00000467558 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms