RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 LMO1P25800 156 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 HTR2AP28223 471 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 CDAP32320 146 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 ERFP50548 548 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 NCALDP61601 193 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 ZNF181Q2M3W8 571 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 SPANXN4Q5MJ08 99 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 C8orf74Q6P047 294 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 ALDH16A1Q8IZ83 802 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 PAPD5Q8NDF8 572 aaKnown RBP8.39□□□□□ -1.07
HDAC3-203ENST00000467533 NSMAFQ92636 917 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 SLC35B4Q969S0 331 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 CMBLQ96DG6 245 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 TEX37Q96LM6 180 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 CCDC115Q96NT0 180 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 PANX1Q96RD7 426 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 FMO2Q99518 471 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 NKX3-1Q99801 234 aaPredicted RBP8.39□□□□□ -1.07
HDAC3-203ENST00000467533 MEAF6Q9HAF1 191 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 SIAEQ9HAT2 523 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 ASIC5Q9NY37 505 aa8.39□□□□□ -1.07
HDAC3-203ENST00000467533 RPUSD1Q9UJJ7 312 aaKnown RBP8.39□□□□□ -1.07
HDAC3-203ENST00000467533 DNAH1Q9P2D7 4330 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 NPFFO15130 113 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 ADAM20O43506 726 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 OR10H3O60404 316 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 TRIM13O60858 407 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 MT-ATP6P00846 226 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 ETFAP13804 333 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 MRPS34P82930 218 aaKnown RBP8.38□□□□□ -1.07
HDAC3-203ENST00000467533 GUCY1A3Q02108 690 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 GUCA2AQ02747 115 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 PRB3Q04118 309 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-203ENST00000467533 EMX2Q04743 252 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 EGFEM1PQ0D2K5 195 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 PCLAFQ15004 111 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 SGCAQ16586 387 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 FAM91A1Q658Y4 838 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 ULK3Q6PHR2 472 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 ZNF621Q6ZSS3 439 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 IGFN1Q86VF2 1251 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 LSMEM1Q8N8F7 131 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 DTX3Q8N9I9 347 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 Q8NFD4 153 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 NABP1Q96AH0 204 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 TESCQ96BS2 214 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 TMEM19Q96HH6 336 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 NUF2Q9BZD4 464 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 OR2H1Q9GZK4 316 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 NPFFR1Q9GZQ6 430 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 TSPYL1Q9H0U9 437 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 WNT5BQ9H1J7 359 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 SMURF1Q9HCE7 757 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 RAB18Q9NP72 206 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 SIRT7Q9NRC8 400 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 TBCCD1Q9NVR7 557 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 PSMC3IPQ9P2W1 217 aaPredicted RBP8.38□□□□□ -1.07
HDAC3-203ENST00000467533 ONECUT1Q9UBC0 465 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 MAB21L2Q9Y586 359 aa8.38□□□□□ -1.07
HDAC3-203ENST00000467533 A0A1W2PPM1 405 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 MEIOCA2RUB1 952 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 TMEM247A6NEH6 219 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 MCIDASD6RGH6 385 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 F5H5P2 479 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 PEX14O75381 377 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 SLC2A10O95528 541 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 KRT75O95678 551 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 LYL1P12980 280 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 S100A3P33764 101 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 SAA4P35542 130 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 CDKN2CP42773 168 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 DSTNP60981 165 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 KLRD1Q13241 179 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 HABP2Q14520 560 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-203ENST00000467533 KCNJ8Q15842 424 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 HIST3H3Q16695 136 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 DPY19L1Q2PZI1 675 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 CDONQ4KMG0 1287 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 BTN2A1Q7KYR7 527 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 CNPY4Q8N129 248 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 OR11L1Q8NGX0 322 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 MZB1Q8WU39 189 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 SLC38A5Q8WUX1 472 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 GPR61Q9BZJ8 451 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 DNAJB11Q9UBS4 358 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 NKX1-2Q9UD57 310 aaPredicted RBP8.37□□□□□ -1.07
HDAC3-203ENST00000467533 BTNL2Q9UIR0 455 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 NDRG4Q9ULP0 352 aaKnown RBP8.37□□□□□ -1.07
HDAC3-203ENST00000467533 KPTNQ9Y664 436 aa8.37□□□□□ -1.07
HDAC3-203ENST00000467533 A0A0G2JPF8 293 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 HNRNPCL2B2RXH8 293 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 HNRNPCL3B7ZW38 293 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 E9PBE3 544 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 FBP2O00757 339 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 COPEO14579 308 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 MLNRO43193 412 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 HNRNPCL1O60812 293 aaKnown RBP8.36□□□□□ -1.07
HDAC3-203ENST00000467533 ABHD2P08910 425 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 HNRNPCL4P0DMR1 293 aa8.36□□□□□ -1.07
HDAC3-203ENST00000467533 FAHP16930 419 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms