RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 DTYMKP23919 212 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 NPY1RP25929 384 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 GDI1P31150 447 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 OTX1P32242 354 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-211ENST00000466054 CX3CR1P49238 355 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 PRMT2P55345 433 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 VSX2P58304 361 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-211ENST00000466054 PGGHGQ32M88 737 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 ORMDL2Q53FV1 153 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF684Q5T5D7 378 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 UBE2UQ5VVX9 321 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 DNAJC24Q6P3W2 148 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 CALHM1Q8IU99 346 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 GTPBP8Q8N3Z3 284 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF615Q8N8J6 731 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 PRELID2Q8N945 189 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 COQ8AQ8NI60 647 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 N4BP2L2Q92802 583 aaPredicted RBP2.4□□□□□ -2.03
LRCH3-211ENST00000466054 RNF157Q96PX1 679 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 NMRK1Q9NWW6 199 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 GGA2Q9UJY4 613 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 PCM1Q15154 2024 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 CAMTA1Q9Y6Y1 1673 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 CABIN1Q9Y6J0 2220 aa2.4□□□□□ -2.03
LRCH3-211ENST00000466054 NUP214P35658 2090 aaPredicted RBP2.39□□□□□ -2.03
LRCH3-211ENST00000466054 TRAV40A0A0B4J280 105 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 A0A0U1RQV1 116 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 NUPL2O15504 423 aaKnown RBP2.39□□□□□ -2.03
LRCH3-211ENST00000466054 OR2J3O76001 311 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 KRT14P02533 472 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 FTH1P02794 183 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 ADRA2AP08913 450 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF286BP0CG31 522 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CT45A6P0DMU7 189 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CT45A5P0DMU8 189 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CT45A7P0DMV0 189 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CEACAM3P40198 252 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CSNK1EP49674 416 aaKnown RBP2.39□□□□□ -2.03
LRCH3-211ENST00000466054 UBE2NP61088 152 aaKnown RBP2.39□□□□□ -2.03
LRCH3-211ENST00000466054 STXBP1P61764 594 aaKnown RBP2.39□□□□□ -2.03
LRCH3-211ENST00000466054 COX19Q49B96 90 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CT45A1Q5HYN5 189 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 PPM1LQ5SGD2 360 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CCDC183Q5T5S1 534 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 METTL21CQ5VZV1 264 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 C22orf42Q6IC83 251 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 REEP3Q6NUK4 255 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 PRMT9Q6P2P2 845 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 PLET1Q6UQ28 207 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 IGFL1Q6UW32 110 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 SHISA6Q6ZSJ9 500 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 SLC16A14Q7RTX9 510 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 RNF182Q8N6D2 247 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 OR4A4PQ8NGN8 299 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 OR5B3Q8NH48 314 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 CT45A3Q8NHU0 189 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF461Q8TAF7 563 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 TGS1Q96RS0 853 aaKnown RBP2.39□□□□□ -2.03
LRCH3-211ENST00000466054 VANGL2Q9ULK5 521 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF835Q9Y2P0 537 aa2.39□□□□□ -2.03
LRCH3-211ENST00000466054 IGLV2-18A0A075B6J9 118 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 OR6C74A6NCV1 312 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 AP3B1O00203 1094 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 BPY2O14599 106 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF207O43670 478 aaKnown RBP2.38□□□□□ -2.03
LRCH3-211ENST00000466054 CHST1O43916 411 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 FKBP6O75344 327 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 GCM2O75603 506 aaPredicted RBP2.38□□□□□ -2.03
LRCH3-211ENST00000466054 RBBP9O75884 186 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 RCBTB2O95199 551 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 CD3GP09693 182 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 ACSM4P0C7M7 580 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 OR56A5P0C7T3 313 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 LINC00869P0C866 280 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 RAB3AP20336 220 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 SSTR5P35346 364 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 RND2P52198 227 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 CDH17Q12864 832 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 SRSF5Q13243 272 aaKnown RBP2.38□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF726P1Q15940 193 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 LY6EQ16553 131 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 AVPI1Q5T686 147 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 CARD17Q5XLA6 110 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF880Q6PDB4 577 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 HMGN2P46Q86SG4 172 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 LYPD1Q8N2G4 141 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 PIFOQ8TCI5 191 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 OR10C1Q96KK4 312 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 OR5B12Q96R08 314 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 MICU1Q9BPX6 476 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 TMEM165Q9HC07 324 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 CCDC59Q9P031 241 aaKnown RBP2.38□□□□□ -2.03
LRCH3-211ENST00000466054 TRMT112Q9UI30 125 aaKnown RBP2.38□□□□□ -2.03
LRCH3-211ENST00000466054 PITPNC1Q9UKF7 332 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 TUBGCP6Q96RT7 1819 aa2.38□□□□□ -2.03
LRCH3-211ENST00000466054 DENND4AQ7Z401 1863 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 IGLV1-36A0A0B4J1U3 117 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 TRBV9A0A0B4J1U6 114 aa2.37□□□□□ -2.03
LRCH3-211ENST00000466054 C7orf66A4D0T2 115 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms