RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 H3BN98 237 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 RER1O15258 196 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 SYNGR3O43761 229 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 FAM157BP0CG42 384 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 COX5BP10606 129 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 PSKH1P11801 424 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 PYCR1P32322 319 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 GRK5P34947 590 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 SLC25A1P53007 311 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 GLO1Q04760 184 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 TBC1D28Q2M2D7 210 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 PARP8Q8N3A8 854 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 ATG16L2Q8NAA4 619 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 TEX47Q8TBZ9 253 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 MRPL24Q96A35 216 aaKnown RBP15.21■□□□□ 0.03
VPS52-214ENST00000463486 BDH2Q9BUT1 245 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 GABARAPL1Q9H0R8 117 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 CDH20Q9HBT6 801 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 CYB5R1Q9UHQ9 305 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 KLHL21Q9UJP4 597 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 CMAHPQ9Y471 501 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 SPEF1Q9Y4P9 236 aa15.21■□□□□ 0.03
VPS52-214ENST00000463486 C5orf49A4QMS7 147 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 G3V2T6 193 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 MITFO75030 526 aaPredicted RBP15.2■□□□□ 0.02
VPS52-214ENST00000463486 CLUP10909 449 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 FCGR1AP12314 374 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 ZNF250P15622 560 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 SPI1P17947 270 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 APLNRP35414 380 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 EVX1P49640 407 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 ARHGDIAP52565 204 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 ERVS71-1P61550 626 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 GALK2Q01415 458 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 TEKQ02763 1124 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 SCRN3Q0VDG4 424 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 LINC01590Q5TEZ4 76 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 KDM4DQ6B0I6 523 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 SLC27A4Q6P1M0 643 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 LYPD4Q6UWN0 246 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 HIPK1Q86Z02 1210 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 ALDH16A1Q8IZ83 802 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 SVOPLQ8N434 492 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 OR9Q1Q8NGQ5 310 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 OR2T4Q8NH00 348 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 DNAJC9Q8WXX5 260 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 TRMT61AQ96FX7 289 aaKnown RBP15.2■□□□□ 0.02
VPS52-214ENST00000463486 CENPNQ96H22 339 aaPredicted RBP15.2■□□□□ 0.02
VPS52-214ENST00000463486 ZNF556Q9HAH1 456 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 SLC25A19Q9HC21 320 aa15.2■□□□□ 0.02
VPS52-214ENST00000463486 MYEF2Q9P2K5 600 aaKnown RBP15.2■□□□□ 0.02
VPS52-214ENST00000463486 TMEFF2Q9UIK5 374 aaPredicted RBP15.2■□□□□ 0.02
VPS52-214ENST00000463486 SETD2Q9BYW2 2564 aaPredicted RBP15.19■□□□□ 0.02
VPS52-214ENST00000463486 SGCEO43556 437 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 NGFP01138 241 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 POU1F1P28069 291 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 EPHA2P29317 976 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 CENPAP49450 140 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 GDI2P50395 445 aaKnown RBP15.19■□□□□ 0.02
VPS52-214ENST00000463486 PCK2Q16822 640 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 KRTAP27-1Q3LI81 207 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 TMEM255AQ5JRV8 349 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 TMEM236Q5W0B7 351 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 SLC18B1Q6NT16 456 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 CORO6Q6QEF8 472 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 OR51L1Q8NGJ5 315 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 SLC7A6Q92536 515 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 Q96MF0 132 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 PKP2Q99959 881 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 SEMA6AQ9H2E6 1030 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 MED20Q9H944 212 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 PNRC2Q9NPJ4 139 aaKnown RBP15.19■□□□□ 0.02
VPS52-214ENST00000463486 PAPOLBQ9NRJ5 636 aaKnown RBP15.19■□□□□ 0.02
VPS52-214ENST00000463486 PMF1-BGLAPU3KQ54 211 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 TLN2Q9Y4G6 2542 aa15.19■□□□□ 0.02
VPS52-214ENST00000463486 IGLV3-9A0A075B6K5 115 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 FAM183AA6NL82 134 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 SURF4O15260 269 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 DOK2O60496 412 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 CLPTM1O96005 669 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 GYPBP06028 91 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 CCNOP22674 350 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 RAD52P43351 418 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 PPOXP50336 477 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 CRISP1P54107 249 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 SNRPD2P62316 118 aaKnown RBP15.18■□□□□ 0.02
VPS52-214ENST00000463486 CFAP77Q6ZQR2 320 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 RFPL4BQ6ZWI9 263 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.18■□□□□ 0.02
VPS52-214ENST00000463486 ZDHHC13Q8IUH4 622 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 ZCCHC24Q8N2G6 241 aaKnown RBP15.18■□□□□ 0.02
VPS52-214ENST00000463486 CIARTQ8N365 385 aaPredicted RBP15.18■□□□□ 0.02
VPS52-214ENST00000463486 PROKR2Q8NFJ6 384 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 OR1F12Q8NHA8 337 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 MARS2Q96GW9 593 aaKnown RBP15.18■□□□□ 0.02
VPS52-214ENST00000463486 SORCS2Q96PQ0 1159 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 OR51B6Q9H340 312 aa15.18■□□□□ 0.02
VPS52-214ENST00000463486 NDRG4Q9ULP0 352 aaKnown RBP15.18■□□□□ 0.02
VPS52-214ENST00000463486 FZR1Q9UM11 496 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms