RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SLC6A5Q9Y345 797 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 RPL36Q9Y3U8 105 aaKnown RBP6.5□□□□□ -1.37
UBE4B-204ENST00000462658 SNX5Q9Y5X3 404 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 CACNA1GO43497 2377 aa6.5□□□□□ -1.37
UBE4B-204ENST00000462658 OR2M5A3KFT3 312 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 EFCAB10A6NFE3 127 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 LIPT2A6NK58 231 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 SNTNA6NMZ2 147 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 RIIAD1A6NNX1 92 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KDM4EB2RXH2 506 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 FTCDNL1E5RQL4 147 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PRR23D1E9PI22 279 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KLRC4-KLRK1H3BQV0 150 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 RHODO00212 210 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PLPP3O14495 311 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 IMPA2O14732 288 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ARPC3O15145 178 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 RNF13O43567 381 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 NME2P1O60361 137 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 MRPS14O60783 128 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 TRAPPC6AO75865 159 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OR6A2O95222 327 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 IFNGP01579 166 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OPN1LWP04000 364 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 CD14P08571 375 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 STSP08842 583 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 HTR1AP08908 422 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PRR23D2P0DMB1 279 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ADORA3P0DMS8 318 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PRF1P14222 555 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 HIST1H1CP16403 213 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF17P17021 662 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 GTF2E2P29084 291 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 SLC15A1P46059 708 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ARG2P78540 354 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 RPL18Q07020 188 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ITGADQ13349 1161 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PMS2P3Q13401 168 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OR7A5Q15622 319 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 SGCBQ16585 318 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM44Q2T9K0 475 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM176BQ3YBM2 270 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 AADACL4Q5VUY2 407 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PLBD1Q6P4A8 553 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KCTD8Q6ZWB6 473 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 AHSA2Q719I0 299 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 H1FNTQ75WM6 255 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 PRSS48Q7RTY5 328 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 YRDCQ86U90 279 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KLBQ86Z14 1044 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 CPOQ8IVL8 374 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 STX19Q8N4C7 294 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 FDCSPQ8NFU4 85 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OR52E2Q8NGJ4 325 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OR4K13Q8NH42 304 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OR14L1PQ8NHC6 308 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OTULINQ96BN8 352 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 OR5B2Q96R09 309 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 GPX7Q96SL4 187 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 RHNO1Q9BSD3 238 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 COPS4Q9BT78 406 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KATNB1Q9BVA0 655 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 FN3KQ9H479 309 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 TMEM185BQ9H7F4 350 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 HINT3Q9NQE9 182 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KLHL1Q9NR64 748 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 INIPQ9NRY2 104 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 FKBP14Q9NWM8 211 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 MRPL39Q9NYK5 338 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 CNOT2Q9NZN8 540 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 SEC14L4Q9UDX3 406 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF346Q9UL40 294 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 KLF13Q9Y2Y9 288 aaPredicted RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 MRPS18CQ9Y3D5 142 aaKnown RBP6.49□□□□□ -1.37
UBE4B-204ENST00000462658 HDGFL3Q9Y3E1 203 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 ADAM18Q9Y3Q7 739 aa6.49□□□□□ -1.37
UBE4B-204ENST00000462658 FAM208BQ5VWN6 2430 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ATRXP46100 2492 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 FAM183AA6NL82 134 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 C11orf98E9PRG8 122 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MS4A18H0YCH9 400 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 M0R3G1 203 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 CEACAM4O75871 244 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 TXNDC12O95881 172 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 MT-ND2P03891 347 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 CDK1P06493 297 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 DBTP11182 482 aaKnown RBP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PIPP12273 146 aaPredicted RBP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ZNF3P17036 446 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PAICSP22234 425 aaKnown RBP6.48□□□□□ -1.37
UBE4B-204ENST00000462658 AHCYP23526 432 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 GDF1P27539 372 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 SHC1P29353 583 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 SFTPDP35247 375 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 ALDH3B2P48448 385 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 CDH11P55287 796 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 OR2B6P58173 313 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 B3GALT5-AS1P59052 145 aa6.48□□□□□ -1.37
UBE4B-204ENST00000462658 PLGLB1Q02325 96 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms