RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 SELENOWP63302 87 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 CDK5R2Q13319 367 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 Q6ZR03 302 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 VTCN1Q7Z7D3 282 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 OAFQ86UD1 273 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 SGMS2Q8NHU3 365 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 SAR1AQ9NR31 198 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 TMEM106BQ9NUM4 274 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 PURGQ9UJV8 347 aaKnown RBP13.58□□□□□ -0.24
COL7A1-204ENST00000462475 ADAM18Q9Y3Q7 739 aa13.58□□□□□ -0.24
COL7A1-204ENST00000462475 LOC100653049A0A140TA62 436 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 HTR3EA5X5Y0 456 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 EFCAB9A8MZ26 197 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 FFAR1O14842 300 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 DOK2O60496 412 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 KRT34O76011 436 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 GSTM3P21266 225 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 FPR2P25090 351 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 HTR5AP47898 357 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 ERFP50548 548 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 PRKCDQ05655 676 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 TUSC1Q2TAM9 212 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 MESTQ5EB52 335 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 OTPQ5XKR4 325 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 ARL9Q6T311 187 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 SYT9Q86SS6 491 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 TREML1Q86YW5 311 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 ZNF283Q8N7M2 679 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 SIGLECL1Q8N7X8 197 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 NPEPL1Q8NDH3 523 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 OR2Z1Q8NG97 314 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 TBCCD1Q9NVR7 557 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 EGFL7Q9UHF1 273 aa13.57□□□□□ -0.24
COL7A1-204ENST00000462475 A0A087WUU8 490 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 ELOVL7A1L3X0 281 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 TRAPPC2LH3BP13 241 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 CDC42EP2O14613 210 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 IFNW1P05000 195 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 COX5BP10606 129 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 ZNF26P17031 533 aaPredicted RBP13.56□□□□□ -0.24
COL7A1-204ENST00000462475 KITLGP21583 273 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 IFNA8P32881 189 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 GPR4P46093 362 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 BTG1P62324 171 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 SCRN3Q0VDG4 424 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 TRAM2Q15035 370 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 ZMYND11Q15326 602 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 MAPRE2Q15555 327 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 ARMCX4Q5H9R4 360 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 KLF17Q5JT82 389 aaPredicted RBP13.56□□□□□ -0.24
COL7A1-204ENST00000462475 CGB2Q6NT52 195 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 VASH1Q7L8A9 365 aaPredicted RBP13.56□□□□□ -0.24
COL7A1-204ENST00000462475 ZER1Q7Z7L7 766 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 SPICQ8N5J4 248 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 PCYOX1LQ8NBM8 494 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 ITLN1Q8WWA0 313 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 LZICQ8WZA0 190 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 SLC7A6Q92536 515 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 POP5Q969H6 163 aaKnown RBP13.56□□□□□ -0.24
COL7A1-204ENST00000462475 CMBLQ96DG6 245 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 Q96M85 177 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 DUX5Q96PT3 197 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 SIGLEC11Q96RL6 698 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 FNDC11Q9BVV2 318 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 C1QTNF5Q9BXJ0 243 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 NTN4Q9HB63 628 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
COL7A1-204ENST00000462475 DDX28Q9NUL7 540 aaKnown RBP13.56□□□□□ -0.24
COL7A1-204ENST00000462475 GID8Q9NWU2 228 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 CMTM6Q9NX76 183 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 STARD10Q9Y365 291 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
COL7A1-204ENST00000462475 SGCEO43556 437 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 TROVE2P10155 538 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL7A1-204ENST00000462475 CTLA4P16410 223 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 ZNF12P17014 697 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 TNFRSF1AP19438 455 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 TNFSF4P23510 183 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 RPL4P36578 427 aaKnown RBP13.55□□□□□ -0.24
COL7A1-204ENST00000462475 SLC9A3P48764 834 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 ZNF154Q13106 437 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 ANKDD1AQ495B1 522 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 TMEM155Q4W5P6 130 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 TBPL2Q6SJ96 375 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 ZNF730Q6ZMV8 503 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 FAM122BQ7Z309 247 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 HDXQ7Z353 690 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 KLHL36Q8N4N3 616 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 FAM156AQ8NDB6 213 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 ACOT11Q8WXI4 607 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-204ENST00000462475 RCN3Q96D15 328 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 SAMD8Q96LT4 415 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 VIPAS39Q9H9C1 493 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 MRGBPQ9NV56 204 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 FGFR1OP2Q9NVK5 253 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 GRHPRQ9UBQ7 328 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 ZNF69Q9UC07 566 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 POLR3KQ9Y2Y1 108 aaPredicted RBP13.55□□□□□ -0.24
COL7A1-204ENST00000462475 PCDHGB1Q9Y5G3 927 aa13.55□□□□□ -0.24
COL7A1-204ENST00000462475 AUP1Q9Y679 476 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms