RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 CDC40O60508 579 aaKnown RBP eCLIP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CCNB2O95067 398 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 LSM8O95777 96 aaKnown RBP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 HPRT1P00492 218 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 POLR2MP0CAP2 368 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 OR5H8P0DN80 308 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF250P15622 560 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 MAS1LP35410 378 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CCT6AP40227 531 aaKnown RBP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 RPS10P46783 165 aaKnown RBP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CRISP3P54108 245 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 REG3AQ06141 175 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 DNAJC3Q13217 504 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 GGTLC2Q14390 218 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 SOHLH1Q5JUK2 328 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 AGBL2Q5U5Z8 902 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 SPECC1LQ69YQ0 1117 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CLEC2AQ6UVW9 174 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 MBOAT1Q6ZNC8 495 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 C12orf56Q8IXR9 622 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 Q8N9L7 120 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 NUBPLQ8TB37 319 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 ABHD3Q8WU67 409 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 TM4SF18Q96CE8 201 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 LRRC58Q96CX6 371 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 PRRC1Q96M27 445 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 ANKRD60Q9BZ19 345 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 NEUROG2Q9H2A3 272 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 TPK1Q9H3S4 243 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 NOX3Q9HBY0 568 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CRLF2Q9HC73 371 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CHRAC1Q9NRG0 131 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 DDX18Q9NVP1 670 aaKnown RBP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CLN6Q9NWW5 311 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 RBAKQ9NYW8 714 aaPredicted RBP1.98□□□□□ -2.09
HDAC6-212ENST00000461608 CTSFQ9UBX1 484 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 INSRP06213 1382 aa1.98□□□□□ -2.09
HDAC6-212ENST00000461608 LTBP1Q14766 1721 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 WDR62O43379 1518 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 TTC41PQ6P2S7 1318 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 IGLV4-69A0A075B6H9 119 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 A0A096LNJ9 63 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 IGHV5-51A0A0C4DH38 117 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CIB4A0PJX0 185 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 OR6C74A6NCV1 312 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 H0YC42 278 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CHMP2AO43633 222 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CD5LO43866 347 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 AIREO43918 545 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 SPAG7O75391 227 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 GABARAPO95166 117 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 DCNP07585 359 aaKnown RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 GNAO1P09471 354 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 UBCP0CG48 685 aaKnown RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 IGHV1-8P0DP01 117 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ERGP11308 486 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 GFAPP14136 432 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PRKACAP17612 351 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 RAB3AP20336 220 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CEACAM6P40199 344 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF136P52737 540 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ZNF138P52744 262 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CRISP1P54107 249 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CLDN8P56748 225 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 RAB11AP62491 216 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PRR3P79522 188 aaKnown RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 MECOMQ03112 1051 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CAPRIN1Q14444 709 aaKnown RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ITIH4Q14624 930 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 C16orf72Q14CZ0 275 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 RAB11BQ15907 218 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 KLHL40Q2TBA0 621 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PIP5KL1Q5T9C9 394 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 TTC19Q6DKK2 380 aaPredicted RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 H3F3CQ6NXT2 135 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 DUX4L9Q6RFH8 374 aaPredicted RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 FAM92BQ6ZTR7 304 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 LINC00173Q6ZV60 143 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 MBOAT2Q6ZWT7 520 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ABHD12BQ7Z5M8 362 aaPredicted RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ENTHD1Q8IYW4 607 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CHST4Q8NCG5 386 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ZFP90Q8TF47 636 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 APH1BQ8WW43 257 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 TMEM158Q8WZ71 300 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PEX13Q92968 403 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 MRGPRFQ96AM1 343 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 EEF1AKMT3Q96AZ1 226 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ECHDC3Q96DC8 303 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CAMK2N2Q96S95 79 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 TEKT3Q9BXF9 490 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 CALN1Q9BXU9 219 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 TMEM38AQ9H6F2 299 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 FANCEQ9HB96 536 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 LYRM4Q9HD34 91 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ZC4H2Q9NQZ6 224 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PDP1Q9P0J1 537 aaPredicted RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 MYEF2Q9P2K5 600 aaKnown RBP1.97□□□□□ -2.09
HDAC6-212ENST00000461608 ST3GAL6Q9Y274 331 aa1.97□□□□□ -2.09
HDAC6-212ENST00000461608 PRG3Q9Y2Y8 225 aaPredicted RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms