RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 OTPQ5XKR4 325 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 CYB5R2Q6BCY4 276 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SYT9Q86SS6 491 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 AQP12AQ8IXF9 295 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 ADGRG5Q8IZF4 528 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SDR9C7Q8NEX9 313 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 OR1J1Q8NGS3 322 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 ABHD4Q8TB40 342 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 SNX33Q8WV41 574 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 POM121L2Q96KW2 1035 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 TSSK2Q96PF2 358 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.29
VARS-219ENST00000461328 MYEF2Q9P2K5 600 aaKnown RBP13.21□□□□□ -0.29
VARS-219ENST00000461328 GPR160Q9UJ42 338 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 ABCA1O95477 2261 aa13.21□□□□□ -0.29
VARS-219ENST00000461328 LOC100509620A0A075B734 347 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 SGCEO43556 437 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 IDH3BO43837 385 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 MPZL1O95297 269 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 GASTP01350 101 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 GSTM3P21266 225 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 ERFP50548 548 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 GLO1Q04760 184 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.2□□□□□ -0.3
VARS-219ENST00000461328 MICAQ29983 383 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 PGM2L1Q6PCE3 622 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 ARL9Q6T311 187 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 ZNF540Q8NDQ6 660 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 OR52E2Q8NGJ4 325 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 CANT1Q8WVQ1 401 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 SLC7A6OSQ96CW6 309 aaPredicted RBP13.2□□□□□ -0.3
VARS-219ENST00000461328 WACQ9BTA9 647 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 BPESC1Q9GZL8 116 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 MS4A5Q9H3V2 200 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 FN3KQ9H479 309 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 PLEK2Q9NYT0 353 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 TAAR3PQ9P1P4 343 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 ASH2LQ9UBL3 628 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 ABCA2Q9BZC7 2435 aa13.2□□□□□ -0.3
VARS-219ENST00000461328 IGHV4-61A0A0C4DH41 118 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 E2F6O75461 281 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 SOX14O95416 240 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 ABHD16AO95870 558 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 GPANK1O95872 356 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 CLPTM1O96005 669 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 HLA-DQA2P01906 255 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 MT-ND5P03915 603 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 IGFBP1P08833 259 aaPredicted RBP13.19□□□□□ -0.3
VARS-219ENST00000461328 IGHV4-31P0DP07 118 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 NAT2P11245 290 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 ZNF16P17020 682 aaPredicted RBP13.19□□□□□ -0.3
VARS-219ENST00000461328 HOXB6P17509 224 aaKnown RBP13.19□□□□□ -0.3
VARS-219ENST00000461328 GCH1P30793 250 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 WNT5AP41221 380 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 GZMKP49863 264 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 ARHGDIAP52565 204 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
VARS-219ENST00000461328 RASSF6Q6ZTQ3 369 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 RFPL4BQ6ZWI9 263 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 HIPK1Q86Z02 1210 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 ZNF101Q8IZC7 436 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 UBASH3BQ8TF42 649 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 RACGAP1Q9H0H5 632 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 YY1AP1Q9H869 796 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 ELOVL3Q9HB03 270 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 SRA1Q9HD15 236 aaKnown RBP13.19□□□□□ -0.3
VARS-219ENST00000461328 SLCO1C1Q9NYB5 712 aa13.19□□□□□ -0.3
VARS-219ENST00000461328 JMJD1CQ15652 2540 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 DCTN6O00399 190 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 COX5BP10606 129 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 ZNF250P15622 560 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 RASSF2P50749 326 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 PPP1CBP62140 327 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 BNIP1Q12981 228 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 GK3PQ14409 553 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 MOGQ16653 247 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 MEP1BQ16820 701 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 ZNF718Q3SXZ3 478 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 CHRFAM7AQ494W8 412 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
VARS-219ENST00000461328 TMEM154Q6P9G4 183 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 OR6V1Q8N148 313 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 ZNF786Q8N393 782 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 PROKR2Q8NFJ6 384 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 TEX47Q8TBZ9 253 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 GIPC3Q8TF64 312 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 C4orf45Q96LM5 186 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 SNX18Q96RF0 628 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 TSSK6Q9BXA6 273 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 DGCR6LQ9BY27 220 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 PLA2G12AQ9BZM1 189 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 HINT3Q9NQE9 182 aaKnown RBP13.18□□□□□ -0.3
VARS-219ENST00000461328 ARMC1Q9NVT9 282 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 B9D1Q9UPM9 204 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 POMPQ9Y244 141 aa13.18□□□□□ -0.3
VARS-219ENST00000461328 CHD3Q12873 2000 aaKnown RBP13.18□□□□□ -0.3
VARS-219ENST00000461328 SONP18583 2426 aaKnown RBP13.18□□□□□ -0.3
VARS-219ENST00000461328 IGLV1-36A0A0B4J1U3 117 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms