RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 IFNL4K9M1U5 179 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 PHF1O43189 567 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-228ENST00000459788 SGCEO43556 437 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 KRT36O76013 467 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 NCR1O76036 304 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 CCL2P13500 99 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 NCK1P16333 377 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF26P17031 533 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-228ENST00000459788 KITLGP21583 273 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 GATA3P23771 443 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 CPT2P23786 658 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 FPR3P25089 353 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 GPR4P46093 362 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF81P51508 661 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 PPP1CBP62140 327 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 KRR1Q13601 381 aaKnown RBP8.53□□□□□ -1.04
HDLBP-228ENST00000459788 MAD2L1BPQ15013 274 aaPredicted RBP8.53□□□□□ -1.04
HDLBP-228ENST00000459788 HFEQ30201 348 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 FGD3Q5JSP0 725 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 RPL13AP3Q6NVV1 102 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 TBPL2Q6SJ96 375 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 SMARCD3Q6STE5 483 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF101Q8IZC7 436 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 RFLNBQ8N5W9 214 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 OR51F2Q8NH61 342 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 AKR7LQ8NHP1 331 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 CLDND2Q8NHS1 167 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 SLC25A40Q8TBP6 338 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 RAB1CQ92928 201 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 YIPF5Q969M3 257 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 RAB39BQ96DA2 213 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 FAM46AQ96IP4 442 aaKnown RBP8.53□□□□□ -1.04
HDLBP-228ENST00000459788 NSMCE2Q96MF7 247 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 MUC13Q9H3R2 512 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 SAP30LQ9HAJ7 183 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 IL1RAPQ9NPH3 570 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
HDLBP-228ENST00000459788 EGFL7Q9UHF1 273 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 TAGLN3Q9UI15 199 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 FZR1Q9UM11 496 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 ADAM18Q9Y3Q7 739 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 GRIP1Q9Y3R0 1128 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 OR6C6A6NF89 314 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 CLDN25C9JDP6 229 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 LYNX1G3V0Z9 82 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 SURF4O15260 269 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 PPIHO43447 177 aaKnown RBP8.52□□□□□ -1.05
HDLBP-228ENST00000459788 GADD45GO95257 159 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 FABP3P05413 133 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 MSMBP08118 114 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 LYNX1P0DP58 116 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 GAAP10253 952 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 CTLA4P16410 223 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 HOXB6P17509 224 aaKnown RBP8.52□□□□□ -1.05
HDLBP-228ENST00000459788 TCN1P20061 433 aaPredicted RBP8.52□□□□□ -1.05
HDLBP-228ENST00000459788 FUT4P22083 530 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 CCNOP22674 350 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 TNFSF4P23510 183 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 SLC6A6P31641 620 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 MAGEB1P43366 347 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 HMGA2P52926 109 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 LMO4P61968 165 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 HIST1H3AP68431 136 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 CCL8P80075 99 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 CDK5R2Q13319 367 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 GK3PQ14409 553 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 TRIP10Q15642 601 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 RFX4Q33E94 735 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 SLC36A3Q495N2 470 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 HIST2H3PS2Q5TEC6 136 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 LIPNQ5VXI9 398 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 ZNF774Q6NX45 483 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 C1orf94Q6P1W5 598 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 HIST2H3AQ71DI3 136 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 VASH1Q7L8A9 365 aaPredicted RBP8.52□□□□□ -1.05
HDLBP-228ENST00000459788 IGFN1Q86VF2 1251 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 GJC3Q8NFK1 279 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 OR5L1Q8NGL2 311 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 ABHD4Q8TB40 342 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 TMEM186Q96B77 213 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 COQ7Q99807 217 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 SOX7Q9BT81 388 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 OR2J1Q9GZK6 312 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 HDHD2Q9H0R4 259 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 KCNG2Q9UJ96 466 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 TMCC3Q9ULS5 477 aa8.52□□□□□ -1.05
HDLBP-228ENST00000459788 PPIAL4EA0A075B759 164 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 PPIAL4CA0A0B4J2A2 164 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 TRBV4-1A0A0J9YWV2 114 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 PPIAL4DF5H284 164 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 J3QLI3 93 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 ARPC2O15144 300 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 DOK2O60496 412 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 SLC16A7O60669 478 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 FSTL3O95633 263 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 ABHD16AO95870 558 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 IGHV1-46P01743 117 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 PPIAL4FP0DN26 164 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 RAC2P15153 192 aa8.51□□□□□ -1.05
HDLBP-228ENST00000459788 TNFRSF1AP19438 455 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms