RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SOX14O95416 240 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 HMGN1P05114 100 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 SCG5P05408 212 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 OSMP13725 252 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 ZNF3P17036 446 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 GRK5P34947 590 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 TEKQ02763 1124 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 ATP6AP1Q15904 470 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 SLC27A4Q6P1M0 643 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 TMEM179BQ7Z7N9 219 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 BIVMQ86UB2 503 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 PROKR2Q8NFJ6 384 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 OR8D4Q8NGM9 314 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 OR5K1Q8NHB7 308 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 SYNPRQ8TBG9 265 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 UTP4Q969X6 686 aaKnown RBP13.91□□□□□ -0.18
CD28-203ENST00000458610 C4orf45Q96LM5 186 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 COG8Q96MW5 612 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 FOXN4Q96NZ1 517 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 DCLRE1CQ96SD1 692 aaKnown RBP13.91□□□□□ -0.18
CD28-203ENST00000458610 KIF17Q9P2E2 1029 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 ASH2LQ9UBL3 628 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 REV1Q9UBZ9 1251 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 ATPIF1Q9UII2 106 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 OTOGQ6ZRI0 2925 aa13.91□□□□□ -0.18
CD28-203ENST00000458610 LOC100509620A0A075B734 347 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 A0A1W2PPW3 197 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 TMEM129A0AVI4 362 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 M0R233 179 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 GPRIN2O60269 458 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 DOK2O60496 412 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 NDUFS7O75251 213 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 MPZL1O95297 269 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 MT-ND5P03915 603 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 INHBBP09529 407 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 PAICSP22234 425 aaKnown RBP13.9□□□□□ -0.18
CD28-203ENST00000458610 PRKACGP22612 351 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 POU1F1P28069 291 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 GCH1P30793 250 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 HTR5AP47898 357 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 SLC25A1P53007 311 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 KLF3P57682 345 aaPredicted RBP13.9□□□□□ -0.18
CD28-203ENST00000458610 ZNF718Q3SXZ3 478 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 PAQR4Q8N4S7 273 aaPredicted RBP13.9□□□□□ -0.18
CD28-203ENST00000458610 SLC37A3Q8NCC5 494 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 ICA1LQ8NDH6 482 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 SLC26A10Q8NG04 563 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 OR1J1Q8NGS3 322 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 OR1F12Q8NHA8 337 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 DDOQ99489 341 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 MRPL37Q9BZE1 423 aaKnown RBP13.9□□□□□ -0.18
CD28-203ENST00000458610 DLL4Q9NR61 685 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 CMC2Q9NRP2 79 aa13.9□□□□□ -0.18
CD28-203ENST00000458610 OR6C6A6NF89 314 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 G3V2T6 193 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 H3BSA7 217 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 H7C1Q1 480 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 DCTN6O00399 190 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 ICMTO60725 284 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 TP53P04637 393 aaPredicted RBP13.89□□□□□ -0.19
CD28-203ENST00000458610 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
CD28-203ENST00000458610 GAAP10253 952 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 ZNF250P15622 560 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 FMO3P31513 532 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 ECH1Q13011 328 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 TNK1Q13470 666 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 CCNIQ14094 377 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 ZNF362Q5T0B9 420 aaPredicted RBP13.89□□□□□ -0.19
CD28-203ENST00000458610 VASH1Q7L8A9 365 aaPredicted RBP13.89□□□□□ -0.19
CD28-203ENST00000458610 ZDHHC13Q8IUH4 622 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 CYB561A3Q8NBI2 242 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 OR4Q3Q8NH05 313 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 SNX33Q8WV41 574 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 FAM168AQ92567 244 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 SYT3Q9BQG1 590 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 HDHD2Q9H0R4 259 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 OR51B6Q9H340 312 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 NTN4Q9HB63 628 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 PAPOLBQ9NRJ5 636 aaKnown RBP13.89□□□□□ -0.19
CD28-203ENST00000458610 TBCCD1Q9NVR7 557 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 ENOPH1Q9UHY7 261 aa13.89□□□□□ -0.19
CD28-203ENST00000458610 TRIM64A6NGJ6 449 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 TRIM64BA6NI03 449 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 J3QW42 95 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 NDUFS8O00217 210 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 ABHD16AO95870 558 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 TFP02787 698 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 ADRA2AP08913 450 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 RGS6P49758 472 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 PDLIM4P50479 330 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 PPP1CBP62140 327 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 HIST1H3AP68431 136 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 CRMP1Q14194 572 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 GINS1Q14691 196 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 NKPD1Q17RQ9 610 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 ELFN2Q5R3F8 820 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 HIST2H3PS2Q5TEC6 136 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 DNM1P46Q6ZS02 220 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 HIST2H3AQ71DI3 136 aa13.88□□□□□ -0.19
CD28-203ENST00000458610 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms