RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 LAMP3Q9UQV4 416 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 PCDHGA9Q9Y5G4 932 aaKnown RBP4.58□□□□□ -1.68
PCDH9-203ENST00000456367 LRP5O75197 1615 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 NPIPB9F8W1W9 429 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 LEFTY2O00292 366 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 MT-ATP6P00846 226 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 IGHA1P01876 353 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 APOA2P02652 100 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 C8AP07357 584 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 IQCF3P0C7M6 154 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 CT45A8P0DMV1 189 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 CT45A9P0DMV2 189 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 CTSAP10619 480 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 DPP4P27487 766 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 BLVRBP30043 206 aaPredicted RBP4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ARL3P36405 182 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ID2Q02363 134 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 DSC1Q08554 894 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ELAVL3Q14576 367 aaKnown RBP4.58□□□□□ -1.68
PCDH9-203ENST00000456367 SLC10A1Q14973 349 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 C21orf62-AS1Q17RA5 79 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ARHGAP11BQ3KRB8 267 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 PDLIM3Q53GG5 364 aaPredicted RBP4.58□□□□□ -1.68
PCDH9-203ENST00000456367 CT45A2Q5DJT8 189 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 TXNDC8Q6A555 127 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 MFSD12Q6NUT3 480 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 SLC48A1Q6P1K1 146 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF66Q6ZN08 573 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 GKN2Q86XP6 184 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 OR9A4Q8NGU2 314 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 TMEM68Q96MH6 324 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF75AQ96N20 296 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 CHRDL1Q9BU40 450 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF160Q9HCG1 818 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 TM7SF3Q9NS93 570 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 HAO2Q9NYQ3 351 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 KLRF1Q9NZS2 232 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 TAAR2Q9P1P5 351 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 CA14Q9ULX7 337 aa4.58□□□□□ -1.68
PCDH9-203ENST00000456367 A0A0U1RQK1 487 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 A0A1W2PPH5 198 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PRAMEF27A3QJZ7 478 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ANKUB1A6NFN9 424 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZFP92A6NM28 416 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 HHLA1C9JL84 531 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 FTCDNL1E5RQL4 147 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 F6UZH7 168 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 IGLV3-25P01717 112 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 OR5AC1P0C628 307 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SULT1A1P50225 295 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SPCS3P61009 180 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 HLA-DRB3P79483 266 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PLP2Q04941 152 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZP2Q05996 745 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MELKQ14680 651 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PRAMEF9Q5VWM5 478 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF776Q68DI1 518 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ABHD12BQ7Z5M8 362 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 KREMEN2Q8NCW0 462 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 OR51F2Q8NH61 342 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MSI2Q96DH6 328 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MS4A10Q96PG2 267 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NMNAT3Q96T66 252 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NRIP2Q9BQI9 281 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PCED1AQ9H1Q7 454 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ARV1Q9H2C2 271 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 C19orf25Q9UFG5 118 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CACFD1Q9UGQ2 172 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PADI1Q9ULC6 663 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TNFSF18Q9UNG2 199 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 INSL5Q9Y5Q6 135 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 FER1L4A9Z1Z3 1794 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 TNRC6CQ9HCJ0 1690 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 XKRY2A2RUG3 117 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CXorf65A6NEN9 183 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NPIPA2E9PIF3 369 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NPIPA3F8WFD2 350 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 EIF3GO75821 320 aaKnown RBP eCLIP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 SFT2D2O95562 160 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 IGFBP1P08833 259 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 C6P13671 934 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 F3P13726 295 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 RGRP47804 291 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CDX1P47902 265 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 RPL29P47914 159 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ERVK-16P61578 105 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 KIAA0040Q15053 153 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 UBE2V2Q15819 145 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 HAGHQ16775 308 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PHF19Q5T6S3 580 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZNF787Q6DD87 383 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ESPNLQ6ZVH7 1005 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 USP53Q70EK8 1073 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 NKAIN4Q8IVV8 208 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 PUSL1Q8N0Z8 303 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 MRPS24Q96EL2 167 aaKnown RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 FAM71F1Q96KD3 344 aaPredicted RBP4.57□□□□□ -1.68
PCDH9-203ENST00000456367 CAPNS2Q96L46 248 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ARHGDIGQ99819 225 aa4.57□□□□□ -1.68
PCDH9-203ENST00000456367 ZFYVE21Q9BQ24 234 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms