RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SNRPD1P62314 119 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 RELQ04864 619 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SRSF4Q08170 494 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM115Q12893 351 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 DUSP8Q13202 625 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 C2orf76Q3KRA6 126 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 C4orf46Q504U0 113 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 STEAP1BQ6NZ63 245 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 Q6ZPA2 131 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TMPRSS12Q86WS5 348 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC35F2Q8IXU6 374 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 HIST3H2BBQ8N257 126 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OR2AP1Q8NGE2 309 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 OR5T2Q8NGG2 359 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 LYPD6BQ8NI32 183 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 FRZBQ92765 325 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 RARRES2Q99969 163 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 KCNK6Q9Y257 313 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 COLEC10Q9Y6Z7 277 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 PTPRQQ9UMZ3 2332 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM50AO95807 157 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 EML2O95834 649 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SNRNP70P08621 437 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 IL2RGP31785 369 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ACAA2P42765 397 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF84P51523 738 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 STX4Q12846 297 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 UNC119Q13432 240 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 DHCR24Q15392 516 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 LHX8Q68G74 356 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ANKRD16Q6P6B7 361 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CALHM1Q8IU99 346 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC26A10Q8NG04 563 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 CASTOR1Q8WTX7 329 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 DNASE2BQ8WZ79 361 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 REEP6Q96HR9 211 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 C1orf147Q96MC9 270 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 WDR92Q96MX6 357 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ARHGDIGQ99819 225 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 HIST1H2BLQ99880 126 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 SEC11CQ9BY50 192 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ALX4Q9H161 411 aaPredicted RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 TREM1Q9NP99 234 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 ABRACLQ9P1F3 81 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 MAFFQ9ULX9 164 aa4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 MRPS2Q9Y399 296 aaKnown RBP4.07□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A087X0M5 115 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A1B0GX30 115 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 OIP5O43482 229 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 BCL2L11O43521 198 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KRT33AO76009 404 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 UBCP0CG48 685 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SELEP16581 610 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CD96P40200 585 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KIR3DL2P43630 455 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TFPI2P48307 235 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM50BP56557 158 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 GNB2P62879 340 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 PMPCAQ10713 525 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MLF2Q15773 248 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ANKRD55Q3KP44 614 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TEX38Q6PEX7 206 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 DPY19L4Q7Z388 723 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 PRSS35Q8N3Z0 413 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 OR13C9Q8NGT0 318 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 BPIFA2Q96DR5 249 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 OR7D2Q96RA2 312 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 GPHA2Q96T91 129 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SDF2Q99470 211 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TMEM208Q9BTX3 173 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 KLF16Q9BXK1 252 aaPredicted RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ACTRT3Q9BYD9 372 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SH3BGRL3Q9H299 93 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CACYBPQ9HB71 228 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 PPIL1Q9Y3C6 166 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 V9GY05 133 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 A0A1B0GVT2 93 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 AP4M1O00189 453 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 UGDHO60701 494 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 HLA-AP01891 365 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MELTFP08582 738 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 QDPRP09417 244 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 TIMP2P16035 220 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ZNF17P17021 662 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 PPIBP23284 216 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MPZP25189 248 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SERPINA4P29622 427 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CCR2P41597 374 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SULT1A1P50225 295 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 RPP30P78346 268 aaKnown RBP4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 BDH1Q02338 343 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ERV3-1Q14264 604 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 NKAIN1Q4KMZ8 207 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 MED27Q6P2C8 311 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 CBLN3Q6UW01 205 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 LCTLQ6UWM7 567 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 ACOT7LQ6ZUV0 252 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SLC35D2Q76EJ3 337 aa4.06□□□□□ -1.76
DEPDC1-202ENST00000456315 SPRED2Q7Z698 418 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms