RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 LHX4Q969G2 390 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 TM4SF18Q96CE8 201 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 DTD2Q96FN9 168 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 AMDHD1Q96NU7 426 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 SGIP1Q9BQI5 828 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 GPR62Q9BZJ7 368 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 PLEKHA2Q9HB19 425 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 MED16Q9Y2X0 877 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 WSB1Q9Y6I7 421 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 ELOA3CA0A087WX78 387 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 E5RGE8 158 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 HMGN4O00479 90 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 PMCHP20382 165 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 ASCL1P50553 236 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 CCSMST1Q4G0I0 132 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 BTNL8Q6UX41 500 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 THNSL2Q86YJ6 484 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 C11orf49Q9H6J7 331 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 CMC2Q9NRP2 79 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 LYRM2Q9NU23 88 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 KLHL42Q9P2K6 505 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 NSG2Q9Y328 171 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 FAM221BA6H8Z2 402 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 TRAF3IP2O43734 574 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 DUSP1P28562 367 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 SULT1A1P50225 295 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 AADACL3Q5VUY0 350 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 ZNF385CQ66K41 422 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 GNPNAT1Q96EK6 184 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 DAZAP1Q96EP5 407 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 TMEM106CQ9BVX2 250 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 SLC23A2Q9UGH3 650 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 OR52A4PA6NMU1 304 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 GLCEO94923 617 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 LIMS3P0CW19 117 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 LIMS4P0CW20 117 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 ZNF43P17038 809 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 DDTP30046 118 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 RPP30P78346 268 aaKnown RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 SLC35A1P78382 337 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 DEFB110Q30KQ9 67 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 STT3BQ8TCJ2 826 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 ANKRD9Q96BM1 317 aaPredicted RBP11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 LYSMD1Q96S90 227 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 SIRT7Q9NRC8 400 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 GSN-AS1Q9NRJ2 163 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 TAAR2Q9P1P5 351 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 RPH3ALQ9UNE2 315 aa11.3□□□□□ -0.6
NEDD4L-208ENST00000456173 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 CLEC3AO75596 197 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 MPC2O95563 127 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 C1QAP02745 245 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 OPN1LWP04000 364 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 CXCL2P19875 107 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 NOVA1P51513 510 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 C12orf73Q69YU5 71 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 CNKSR3Q6P9H4 555 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 TMPPEQ6ZT21 453 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 SLC16A11Q8NCK7 471 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 NKX3-1Q99801 234 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 SLC25A19Q9HC21 320 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 OPN4Q9UHM6 478 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 SLC2A1P11166 492 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 HIST1H1CP16403 213 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 GATMP50440 423 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 CDK5Q00535 292 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ERN2Q76MJ5 926 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 LMX1AQ8TE12 382 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 HSD17B8Q92506 261 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 FAM3CQ92520 227 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 TRAPPC1Q9Y5R8 145 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 IGLON5A6NGN9 336 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 GLTPD2A6NH11 291 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 M0QZK8 103 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 HSPB6O14558 160 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 GGCTO75223 188 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 CST4P01036 141 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 USF1P22415 310 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ZP2Q05996 745 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 FAM110CQ1W6H9 321 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 Q5BKY6 102 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ELFN2Q5R3F8 820 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ZNF2Q9BSG1 426 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 LMF2Q9BU23 707 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 MAGT1Q9H0U3 335 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ZDHHC4Q9NPG8 344 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 PLEK2Q9NYT0 353 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 PADI1Q9ULC6 663 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 LMO7Q8WWI1 1683 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 TRAV1-2A0A0B4J238 106 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 SSSCA1O60232 199 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 ADH1BP00325 375 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 MTCP1P56278 107 aa11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 MRM1Q6IN84 353 aaKnown RBP11.29□□□□□ -0.6
NEDD4L-208ENST00000456173 FIGLAQ6QHK4 219 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms