RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 TVP23AA6NH52 213 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 M0R1B8 84 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF593O00488 134 aaPredicted RBP12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 SGCEO43556 437 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 CECR9P0C854 216 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 PATE4P0C8F1 98 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 IDH3GP51553 393 aaPredicted RBP12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 CDH11P55287 796 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 BSPH1Q075Z2 132 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 POU4F2Q12837 409 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF691Q5VV52 312 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 SLC18B1Q6NT16 456 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 RHOUQ7L0Q8 258 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ENTHD1Q8IYW4 607 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF295-AS1Q8N0V1 137 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 HTRA1Q92743 480 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 PIK3IP1Q96FE7 263 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF582Q96NG8 517 aaPredicted RBP12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 FOXN4Q96NZ1 517 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 COQ7Q99807 217 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 KCNS3Q9BQ31 491 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 C1QTNF6Q9BXI9 259 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 HDHD2Q9H0R4 259 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 WNT5BQ9H1J7 359 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 NOX3Q9HBY0 568 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 CLN6Q9NWW5 311 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 RNF115Q9Y4L5 304 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 TMEM14AQ9Y6G1 99 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ABCA4P78363 2273 aa12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 ASH1LQ9NR48 2969 aaKnown RBP12.43□□□□□ -0.42
HMGXB4-204ENST00000455359 SIAH2O43255 324 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 GPANK1O95872 356 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 LOXP28300 417 aaPredicted RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 APLNRP35414 380 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 NUDT6P53370 316 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 NAAAQ02083 359 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 RAB39AQ14964 217 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 RAB35Q15286 201 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 MEP1BQ16820 701 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 TBC1D28Q2M2D7 210 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 ELFN2Q5R3F8 820 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 ADAM5Q6NVV9 412 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 UNQ6126/PRO20091Q6UXV3 157 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 USP51Q70EK9 711 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 SLC16A9Q7RTY1 509 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 ERI1Q8IV48 349 aaKnown RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF584Q8IVC4 421 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 CPEB3Q8NE35 698 aaKnown RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 SLC30A7Q8NEW0 376 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 OR4F15Q8NGB8 312 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 ZMYND19Q96E35 227 aaPredicted RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 DCLRE1CQ96SD1 692 aaKnown RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 CNN2Q99439 309 aaKnown RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 WDR76Q9H967 626 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 PLEK2Q9NYT0 353 aa12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 GDF2Q9UK05 429 aaPredicted RBP12.42□□□□□ -0.42
HMGXB4-204ENST00000455359 OR6C6A6NF89 314 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 M0R129 80 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 ABCD4O14678 606 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 RER1O15258 196 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 SYNGR3O43761 229 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 ENTPD6O75354 484 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 SPARCP09486 303 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 STOMP27105 288 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 GDI2P50395 445 aaKnown RBP12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 AQP4P55087 323 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 ISL1P61371 349 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 IL5RAQ01344 420 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 TLE4Q04727 773 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 MAD2L1BPQ15013 274 aaPredicted RBP12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 SNCBQ16143 134 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF774Q6NX45 483 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 IZUMO2Q6UXV1 221 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 VASH1Q7L8A9 365 aaPredicted RBP12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 C1orf174Q8IYL3 243 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 C8orf59Q8N0T1 100 aaPredicted RBP12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 OR1F12Q8NHA8 337 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 OTOSQ8NHW6 89 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 UBE2FQ969M7 185 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 SPEF1Q9Y4P9 236 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 PCDHGB1Q9Y5G3 927 aa12.41□□□□□ -0.42
HMGXB4-204ENST00000455359 IGHV2OR16-5A0A0B4J2B6 119 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 J3QW42 95 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 PHYHO14832 338 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 DOK2O60496 412 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 ICMTO60725 284 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF35P13682 527 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 PCSK6P29122 969 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 DBPQ10586 325 aaPredicted RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 CCDC92Q53HC0 331 aaPredicted RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 FBXW10Q5XX13 1052 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 ARL9Q6T311 187 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 ZNF704Q6ZNC4 412 aaPredicted RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 DPY19L4Q7Z388 723 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 BCDIN3DQ7Z5W3 292 aaKnown RBP12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 THAP5Q7Z6K1 395 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 NUP37Q8NFH4 326 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 OR6N2Q8NGY6 317 aa12.4□□□□□ -0.42
HMGXB4-204ENST00000455359 ASB17Q8WXJ9 295 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms