RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 TMEM171Q8WVE6 324 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 TRAF4Q9BUZ4 470 aaPredicted RBP24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 GABARAPL3Q9BY60 117 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 ZNF442Q9H7R0 627 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 CDH20Q9HBT6 801 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 TVP23BQ9NYZ1 205 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 SPEF1Q9Y4P9 236 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 PRR23D1E9PI22 279 aaPredicted RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 EI24O14681 340 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 SGCEO43556 437 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 BAG2O95816 211 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 PRR23D2P0DMB1 279 aaPredicted RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 COX5BP10606 129 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 THBS4P35443 961 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 GGT2P36268 569 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 POLR2IP36954 125 aaKnown RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 GALK2Q01415 458 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 SNTB2Q13425 540 aaKnown RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 SNAPC1Q16533 368 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 CCDC92Q53HC0 331 aaPredicted RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 VASH1Q7L8A9 365 aaPredicted RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 GJC3Q8NFK1 279 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 PLEKHA8Q96JA3 519 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 C9orf16Q9BUW7 83 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 HINT3Q9NQE9 182 aaKnown RBP24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 CYB5R1Q9UHQ9 305 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 KCNG2Q9UJ96 466 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 POLR1DQ9Y2S0 133 aa24.16■■□□□ 1.46
SMARCC1-203ENST00000454240 TVP23AA6NH52 213 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 OVOL3O00110 214 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 RER1O15258 196 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 FMO3P31513 532 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 GDI2P50395 445 aaKnown RBP24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 ALDH3A2P51648 485 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 BLVRAP53004 296 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 ADIPOQQ15848 244 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 C12orf73Q69YU5 71 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 C11orf71Q6IPW1 123 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 PLBD1Q6P4A8 553 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 VHLLQ6RSH7 139 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 LYPD4Q6UWN0 246 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 CPOQ8IVL8 374 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 CBR4Q8N4T8 237 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 OTULINQ96BN8 352 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 FOXC2Q99958 501 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 CBLN4Q9NTU7 201 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 PLEK2Q9NYT0 353 aa24.15■■□□□ 1.46
SMARCC1-203ENST00000454240 SYNGR3O43761 229 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 DOK2O60496 412 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 ZNF823P16415 610 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 PCSK6P29122 969 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 GLRXP35754 106 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 EFNB1P98172 346 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 MST1LQ2TV78 715 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 SLC18B1Q6NT16 456 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 CORO6Q6QEF8 472 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 ZNF511Q8NB15 262 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 CDADC1Q9BWV3 514 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 PRRG3Q9BZD7 231 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 CXorf56Q9H5V9 222 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 NDRG4Q9ULP0 352 aaKnown RBP24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 COMMD3-BMI1R4GMX3 469 aa24.14■■□□□ 1.45
SMARCC1-203ENST00000454240 C5orf49A4QMS7 147 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 OR6C6A6NF89 314 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 GLCEO94923 617 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 OR4A8P0C604 315 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 PAX1P15863 534 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 SERPINF1P36955 418 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 PCK2Q16822 640 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 LINC00346Q8IVM7 164 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 OR6K6Q8NGW6 343 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 OR51V1Q9H2C8 321 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 RIBC2Q9H4K1 309 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 WDR76Q9H967 626 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 ZNF701Q9NV72 531 aaPredicted RBP24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 ITGB1BP2Q9UKP3 347 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 ARFGEF3Q5TH69 2177 aa24.13■■□□□ 1.45
SMARCC1-203ENST00000454240 CCDC168Q8NDH2 2452 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 VSTM5A8MXK1 200 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 PRKYO43930 277 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 GPRIN2O60269 458 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 CCNOP22674 350 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 HTR5AP47898 357 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 UCP2P55851 309 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 ADAM8P78325 824 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 RAB35Q15286 201 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 SWI5Q1ZZU3 235 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 TEX30Q5JUR7 227 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 CXXC5Q7LFL8 322 aaKnown RBP24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 OR1F12Q8NHA8 337 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 SLC29A1Q99808 456 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 CXXC4Q9H2H0 198 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 MARCH7Q9H992 704 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 ATPIF1Q9UII2 106 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 GDF2Q9UK05 429 aaPredicted RBP24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 MYO9AB2RTY4 2548 aa24.12■■□□□ 1.45
SMARCC1-203ENST00000454240 PRODHO43272 600 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 ICMTO60725 284 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 SMPD2O60906 423 aa24.11■■□□□ 1.45
SMARCC1-203ENST00000454240 FAM157BP0CG42 384 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms