RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 HIST1H1CP16403 213 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 CRHBPP24387 322 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 FMO3P31513 532 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 EFNA4P52798 201 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 RPL27P61353 136 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 SNRPD2P62316 118 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 NAAAQ02083 359 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 C3orf36Q3SXR2 165 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC35F1Q5T1Q4 408 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 NXNL2Q5VZ03 156 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 CXXC5Q7LFL8 322 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 JAZF1Q86VZ6 243 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 PRIMA1Q86XR5 153 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 OR10H5Q8NGA6 315 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF519Q8TB69 540 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 RASD2Q96D21 266 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 Q96M85 177 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 B3GAT2Q9NPZ5 323 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 HINT3Q9NQE9 182 aaKnown RBP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 CA10Q9NS85 328 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 PLCXD1Q9NUJ7 323 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 DNAJC27Q9NZQ0 273 aa15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 CRNNQ9UBG3 495 aaPredicted RBP15.62■□□□□ 0.09
SQSTM1-204ENST00000453046 ABCA1O95477 2261 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC35F4A4IF30 521 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 A6NIZ1 184 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 FAM20BO75063 409 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 CRLF1O75462 422 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SEC14L2O76054 403 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC2A10O95528 541 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 RPSAP08865 295 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 CBR1P16152 277 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC25A16P16260 332 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SERPINF1P36955 418 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 RAP1BP61224 184 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 RAP1AP62834 184 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 CRMP1Q14194 572 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SWI5Q1ZZU3 235 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 MESTQ5EB52 335 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 AADACL4Q5VUY2 407 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 CCDC36Q8IYA8 594 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 TMEM123Q8N131 208 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 ARIH2OSQ8N7S6 290 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 FAM169BQ8N8A8 192 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC37A3Q8NCC5 494 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SDR9C7Q8NEX9 313 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 OR4F15Q8NGB8 312 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 OR52E2Q8NGJ4 325 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 OR6N1Q8NGY5 312 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 OR4K13Q8NH42 304 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 ASB10Q8WXI3 467 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 RFKQ969G6 155 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF837Q96EG3 531 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF582Q96NG8 517 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 VRK1Q99986 396 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 MED29Q9NX70 200 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SCN3BQ9NY72 215 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 AASSQ9UDR5 926 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 TPRKBQ9Y3C4 175 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 FKBP7Q9Y680 259 aa15.61■□□□□ 0.09
SQSTM1-204ENST00000453046 SONP18583 2426 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 VSTM5A8MXK1 200 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF99A8MXY4 864 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 PRR23D1E9PI22 279 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 XKRYO14609 159 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 GPRIN2O60269 458 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 ENTPD6O75354 484 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 F12P00748 615 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 IGKV3-15P01624 115 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 IGLV1-44P01699 117 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 CSF3P09919 207 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 PRR23D2P0DMB1 279 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 ARR3P36575 388 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 IDH3GP51553 393 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 SMN1Q16637 294 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 MST1LQ2TV78 715 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF362Q5T0B9 420 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 ARMC4Q5T2S8 1044 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC35D2Q76EJ3 337 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 C20orf196Q8IYI0 205 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 NPEPL1Q8NDH3 523 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 BPIFB6Q8NFQ5 453 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 TXNDC15Q96J42 360 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 CCNB1IP1Q9NPC3 277 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF346Q9UL40 294 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.6■□□□□ 0.094e-8■■□□□ 14.3
SQSTM1-204ENST00000453046 CR1P17927 2039 aa15.6■□□□□ 0.09
SQSTM1-204ENST00000453046 KIAA1324LA8MWY0 1029 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 B9A039 149 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 LY6HO94772 140 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 BCL10O95999 233 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 RENP00797 406 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 CELA3BP08861 270 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 OR4A8P0C604 315 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 PIPP12273 146 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 IFNGR1P15260 489 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 CALCRP30988 508 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 SLC25A1P53007 311 aa15.59■□□□□ 0.09
SQSTM1-204ENST00000453046 ZNF91Q05481 1191 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms