RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 PIGFQ07326 219 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 ST3GAL4Q11206 333 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 SLC16A14Q7RTX9 510 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 PRSS48Q7RTY5 328 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 MDP1Q86V88 176 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 SLC26A10Q8NG04 563 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 C11orf40Q8WZ69 217 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 LGALS12Q96DT0 336 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 MNTQ99583 582 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF416Q9BWM5 594 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 MRPS26Q9BYN8 205 aaKnown RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 CCDC90BQ9GZT6 254 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 SLC24A3Q9HC58 644 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 FGF20Q9NP95 211 aaPredicted RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 INPP5EQ9NRR6 644 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 CHCHD3Q9NX63 227 aaKnown RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 KCNN3Q9UGI6 736 aa11.36□□□□□ -0.59
VPS33A-202ENST00000451053 DIMT1Q9UNQ2 313 aaKnown RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 EXOGQ9Y2C4 368 aaKnown RBP11.36□□□□□ -0.59
VPS33A-202ENST00000451053 TVP23AA6NH52 213 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 DEFB108AA8MXU0 73 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 CASKO14936 926 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 HLA-DQA2P01906 255 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 CELA3BP08861 270 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 CST2P09228 141 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 MMP7P09237 267 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 SBK2P0C263 348 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 MVKQ03426 396 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 HSF2Q03933 536 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 KCNMB1Q16558 191 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 GSG1Q2KHT4 349 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 LINC01590Q5TEZ4 76 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF787Q6DD87 383 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 MYPOPQ86VE0 399 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 CCDC36Q8IYA8 594 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 OR51G2Q8NGK0 314 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 OR52I1Q8NGK6 324 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 NANOS1Q8WY41 292 aaKnown RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 ZMYND19Q96E35 227 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 FBXO17Q96EF6 278 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 MRPL48Q96GC5 212 aaKnown RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 JAM3Q9BX67 310 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 ADGRL4Q9HBW9 690 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 PAK1IP1Q9NWT1 392 aaPredicted RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 MRPL22Q9NWU5 206 aaKnown RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 ERVK-18Q9QC07 812 aa11.35□□□□□ -0.59
VPS33A-202ENST00000451053 EXOSC1Q9Y3B2 195 aaKnown RBP11.35□□□□□ -0.59
VPS33A-202ENST00000451053 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-202ENST00000451053 A6NNC1 897 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 M0R1B8 84 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 UBL3O95164 117 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 IGHA1P01876 353 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 HRGP04196 525 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 OR2T7P0C7T2 308 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 PSKH1P11801 424 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 CBR1P16152 277 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF32P17041 273 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 LOXP28300 417 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-202ENST00000451053 IDH3GP51553 393 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-202ENST00000451053 RAB1AP62820 205 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 DAZAP2Q15038 168 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-202ENST00000451053 SLC36A2Q495M3 483 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 B3GLCTQ6Y288 498 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 SSX8Q7RTT4 187 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 SLC16A9Q7RTY1 509 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF295-AS1Q8N0V1 137 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 ACBD7Q8N6N7 88 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 OR10H5Q8NGA6 315 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 OR2T27Q8NH04 317 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 PLPPR2Q96GM1 343 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 ZNF75AQ96N20 296 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 INTS14Q96SY0 518 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 RHNO1Q9BSD3 238 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 CDCA4Q9BXL8 241 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 YIPF3Q9GZM5 350 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 RNF121Q9H920 327 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 WDR76Q9H967 626 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 MARCH7Q9H992 704 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 CRNNQ9UBG3 495 aaPredicted RBP11.34□□□□□ -0.59
VPS33A-202ENST00000451053 KCNG2Q9UJ96 466 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 TMEM14AQ9Y6G1 99 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 COMMD3-BMI1R4GMX3 469 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 PRR14LQ5THK1 2151 aa11.34□□□□□ -0.59
VPS33A-202ENST00000451053 USP9YO00507 2555 aaPredicted RBP11.33□□□□□ -0.6
VPS33A-202ENST00000451053 IGHV1-18A0A0C4DH31 117 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 DPRXA6NFQ7 191 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 TRIM64CA6NLI5 447 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 C12orf71A8MTZ7 269 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 PHYHO14832 338 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 TMCC2O75069 709 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 CLPTM1O96005 669 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 IGKV3-15P01624 115 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 IGLV1-44P01699 117 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 SMIM18P0DKX4 95 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 ATP6V1B1P15313 513 aa11.33□□□□□ -0.6
VPS33A-202ENST00000451053 ZNF823P16415 610 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms