RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DHRS9Q9BPW9 319 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 CCNB1IP1Q9NPC3 277 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 FAIMQ9NVQ4 179 aa14.84□□□□□ -0.03
PRPF40A-204ENST00000450303 PRSS37A4D1T9 235 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 ZNF432O94892 652 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 WNT11O96014 354 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 CRHBPP24387 322 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 CRABP1P29762 137 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 CDKN2AP42771 156 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 CXCR4P61073 352 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 THEM4Q5T1C6 240 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 AGAP6Q5VW22 663 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 CARD17Q5XLA6 110 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 DTX2Q86UW9 622 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 CLVS1Q8IUQ0 354 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC37A3Q8NCC5 494 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 MAPK1IP1LQ8NDC0 245 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 SDR9C7Q8NEX9 313 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 NOXO1Q8NFA2 376 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 TMEM163Q8TC26 289 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 BCL2L2Q92843 193 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 OTULINQ96BN8 352 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 KCNK17Q96T54 332 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 NMNAT3Q96T66 252 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 LINC00470Q9BZP3 86 aa14.83□□□□□ -0.04
PRPF40A-204ENST00000450303 NAV3Q8IVL0 2385 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 FAM171A2A8MVW0 826 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 RNF223E7ERA6 249 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 ATP6V1G2-DDX39BF2Z307 99 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 H3BSA7 217 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 TLX2O43763 284 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 PGA4P0DJD7 388 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 PGA3P0DJD8 388 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 ISL1P61371 349 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 ARF1P84077 181 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 LSAMPQ13449 338 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 C20orf196Q8IYI0 205 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 TMEM123Q8N131 208 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 FBXL14Q8N1E6 418 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 SVOPQ8N4V2 548 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 SYT14Q8NB59 555 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 NPEPL1Q8NDH3 523 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 HTRA1Q92743 480 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 TMEM54Q969K7 222 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 ZNF837Q96EG3 531 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 Q96MT0 163 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 CACNG6Q9BXT2 260 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 MRPL13Q9BYD1 178 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 GLTPQ9NZD2 209 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 VSX1Q9NZR4 365 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 MOKQ9UQ07 419 aa14.82□□□□□ -0.04
PRPF40A-204ENST00000450303 IGHV1-18A0A0C4DH31 117 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC22A23A1A5C7 686 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 SNTNA6NMZ2 147 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC1A7O00341 560 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 PRKYO43930 277 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC2A10O95528 541 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 GUCA1AP43080 201 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 SLC25A1P53007 311 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 UBE2NP61088 152 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 SNRPGP62308 76 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 CDK5R2Q13319 367 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 CRMP1Q14194 572 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 NEDD8Q15843 81 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 PHYHD1Q5SRE7 291 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 ZNF362Q5T0B9 420 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 MEDAGQ5VYS4 303 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 CXXC5Q7LFL8 322 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 ERI1Q8IV48 349 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 MUC15Q8N387 334 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 OR2T4Q8NH00 348 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 FBLIM1Q8WUP2 373 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 IPCEF1Q8WWN9 437 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 IL4I1Q96RQ9 567 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 ULBP2Q9BZM5 246 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 NELFAQ9H3P2 528 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 GPR35Q9HC97 309 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 CBLN4Q9NTU7 201 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 CLN6Q9NWW5 311 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 FKBP7Q9Y680 259 aa14.81□□□□□ -0.04
PRPF40A-204ENST00000450303 CSPG4Q6UVK1 2322 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 H7C1C5 153 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 SSX4O60224 188 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 KHDRBS3O75525 346 aaKnown RBP14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 SEC14L2O76054 403 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 QDPRP09417 244 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 CENPAP49450 140 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 ZNF84P51523 738 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 LCN6P62502 163 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 RUNX1T1Q06455 604 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 CEACAM16Q2WEN9 425 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 NXNL2Q5VZ03 156 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 C11orf71Q6IPW1 123 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 PLBD1Q6P4A8 553 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 ANKRD16Q6P6B7 361 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 CPOQ8IVL8 374 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 GID4Q8IVV7 300 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 WDFY1Q8IWB7 410 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 CYB561A3Q8NBI2 242 aa14.8□□□□□ -0.04
PRPF40A-204ENST00000450303 BPIFB6Q8NFQ5 453 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms