RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 C11orf40Q8WZ69 217 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 EXT2Q93063 718 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BHQ93079 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TAAR8Q969N4 342 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MRGPRFQ96AM1 343 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 NTNG2Q96CW9 530 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MUCL1Q96DR8 90 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RNFT2Q96EX2 444 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ALG14Q96F25 216 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 WDYHV1Q96HA8 205 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PYURFQ96I23 114 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PRAP1Q96NZ9 151 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 OR4K3Q96R72 315 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 COPS8Q99627 209 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BNQ99877 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HIST1H2BMQ99879 126 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 EGFL8Q99944 293 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CBWD1Q9BRT8 395 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SYT17Q9BSW7 474 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ALKBH7Q9BT30 221 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 FAAP24Q9BTP7 215 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 WWTR1Q9GZV5 400 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 SLC25A31Q9H0C2 315 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 C1orf198Q9H425 327 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 RIOX1Q9H6W3 641 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF430Q9H8G1 570 aaPredicted RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 WFDC1Q9HC57 220 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 TMEM74BQ9NUR3 256 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CLEC5AQ9NY25 188 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ELOVL5Q9NYP7 299 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 FOXJ2Q9P0K8 574 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 MRPL27Q9P0M9 148 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PEF1Q9UBV8 284 aaKnown RBP3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 HSPB7Q9UBY9 170 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 CHRNA9Q9UGM1 479 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 IL17BQ9UHF5 180 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 DKKL1Q9UK85 242 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 PITPNC1Q9UKF7 332 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ADAM18Q9Y3Q7 739 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 DNAJC15Q9Y5T4 150 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 LOC285556D6RIA3 1793 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 ADAMTS20P59510 1910 aa3.25□□□□□ -1.89
HMGB3P8-201ENST00000449709 COL4A4P53420 1690 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 BRWD3Q6RI45 1802 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 A0A087X1B8 175 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 ELOVL7A1L3X0 281 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 A1L4Q6 167 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 C7orf77A4D0Y5 90 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 UNC119BA6NIH7 251 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF716A6NP11 495 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SERPINE3A8MV23 424 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 TEX22C9J3V5 150 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 J3KR12 359 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 CXCR6O00574 342 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 RFXANKO14593 260 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SMAD9O15198 467 aaKnown RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 B4GALT5O43286 388 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 RGS14O43566 566 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SYT7O43581 403 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SPRY2O43597 315 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 PLRG1O43660 514 aaKnown RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 TCF21O43680 179 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SSNA1O43805 119 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 MFSD11O43934 449 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 GMFGO60234 142 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 GJB3O75712 270 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 TOXO94900 526 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 TNFSF15O95150 251 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 NDUFB8O95169 186 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 METTL18O95568 372 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 CYB5R3P00387 301 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 PNPP00491 289 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 PDGFBP01127 241 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 IGHEP01854 428 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 C1QCP02747 245 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 AMBPP02760 352 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 RPN2P04844 631 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SERPIND1P05546 499 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 LIPFP07098 398 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 ERCC1P07992 297 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 SRPRAP08240 638 aaKnown RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 ALPIP09923 528 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 ZNF735P0CB33 412 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 CD37P11049 281 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 PSMB1P20618 241 aaKnown RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 GZMHP20718 246 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 CCNOP22674 350 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 GLRA1P23415 457 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 GNRHRP30968 328 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 AKT2P31751 481 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 CD80P33681 288 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 BSGP35613 385 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 NAA10P41227 235 aaPredicted RBP3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 PITPNBP48739 271 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 KHKP50053 298 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 H2BFSP57053 126 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 TAS2R50P59544 299 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 TPI1P60174 286 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 UBE2G2P60604 165 aa3.24□□□□□ -1.89
HMGB3P8-201ENST00000449709 HBA1P69905 142 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms